Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_J19
         (381 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.40 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.40 
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    21   6.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   8.5  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.6 bits (51), Expect = 0.40
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -1

Query: 375 PIRKXCLNDRSETSDDNERLTSDVKTXSIFDPELYSCQNEVLNLTGSDDEI 223
           PI    L ++  T  + E L  D+K    F+P L+    E ++L G D E+
Sbjct: 151 PIFLYALGEQPLTEQNLEELR-DLKETYPFNPVLFISSLENISLNGIDPEL 200


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 0.40
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -1

Query: 375 PIRKXCLNDRSETSDDNERLTSDVKTXSIFDPELYSCQNEVLNLTGSDDEI 223
           PI    L ++  T  + E L  D+K    F+P L+    E ++L G D E+
Sbjct: 189 PIFLYALGEQPLTEQNLEELR-DLKETYPFNPVLFISSLENISLNGIDPEL 238


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
          homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 9  GPRTXVRRAPRCKNIRFQYLHIVNRYRY 92
          GP    RR  R    RFQ L +   + Y
Sbjct: 2  GPNGCPRRRGRQTYTRFQTLELEKEFHY 29


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 354  NDRSETSDDNERLTSDVKTXSI 289
            +DR    D ++RLTS     SI
Sbjct: 1382 SDRGRNDDGSDRLTSPPTPLSI 1403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,743
Number of Sequences: 438
Number of extensions: 1042
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)