Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_J17
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003460-1|AAO39463.1|  145|Drosophila melanogaster RH29440p pro...    87   3e-17
AE014297-2607|AAF55616.1|  145|Drosophila melanogaster CG5454-PA...    87   3e-17
AF174492-1|AAF25614.1| 2343|Drosophila melanogaster filamin1 pro...    29   6.0  
AE014297-2313|AAS65162.1| 2540|Drosophila melanogaster CG3937-PD...    29   6.0  

>BT003460-1|AAO39463.1|  145|Drosophila melanogaster RH29440p
           protein.
          Length = 145

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 42/74 (56%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -2

Query: 688 DTYLTHDSXSVRKTHCTGRKHKDNVKFYYQKWMEEXXXXXXXXXXXXXXXXXXAQNPF-G 512
           DTYLTHDS SVRKTHCTGRKH+DNVKFYYQKWMEE                    NPF G
Sbjct: 10  DTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAGKITNNPFAG 69

Query: 511 NKGTAIPPPWDPSV 470
             G A P P   S+
Sbjct: 70  GPGGAPPKPAGVSI 83


>AE014297-2607|AAF55616.1|  145|Drosophila melanogaster CG5454-PA
           protein.
          Length = 145

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 42/74 (56%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -2

Query: 688 DTYLTHDSXSVRKTHCTGRKHKDNVKFYYQKWMEEXXXXXXXXXXXXXXXXXXAQNPF-G 512
           DTYLTHDS SVRKTHCTGRKH+DNVKFYYQKWMEE                    NPF G
Sbjct: 10  DTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAGKITNNPFAG 69

Query: 511 NKGTAIPPPWDPSV 470
             G A P P   S+
Sbjct: 70  GPGGAPPKPAGVSI 83


>AF174492-1|AAF25614.1| 2343|Drosophila melanogaster filamin1
           protein.
          Length = 2343

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -1

Query: 620 QCEVLLSEMDGGTSTTXHXCNNSGIQSRQNXSKSIW-QQRHCNTTTLGSFGN 468
           Q  + LS  +  ++T  H  NNS    R+N   S   QQ  C  TT  S  N
Sbjct: 31  QATIFLSNNNNSSNTGNHYYNNSNSHGRKNAPNSQQNQQNACVYTTSNSNNN 82


>AE014297-2313|AAS65162.1| 2540|Drosophila melanogaster CG3937-PD,
           isoform D protein.
          Length = 2540

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -1

Query: 620 QCEVLLSEMDGGTSTTXHXCNNSGIQSRQNXSKSIW-QQRHCNTTTLGSFGN 468
           Q  + LS  +  ++T  H  NNS    R+N   S   QQ  C  TT  S  N
Sbjct: 58  QATIFLSNNNNSSNTGNHYYNNSNSHGRKNAPNSQQNQQNACVYTTSNSNNN 109


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,529,523
Number of Sequences: 53049
Number of extensions: 408433
Number of successful extensions: 1171
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)