Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_J17
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical ... 30 1.4
AC006816-2|AAK85508.1| 352|Caenorhabditis elegans Hypothetical ... 30 1.8
AC006816-1|AAN39661.1| 401|Caenorhabditis elegans Hypothetical ... 30 1.8
AB071420-1|BAB86940.1| 401|Caenorhabditis elegans 2-amino-3-car... 30 1.8
AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 2.4
AC024842-6|AAY86285.1| 215|Caenorhabditis elegans Hypothetical ... 28 5.5
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z82093-5|CAB05016.3| 192|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 27 9.6
>U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical
protein F08B4.7 protein.
Length = 142
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -2
Query: 688 DTYLTHDSXSVRKTHCTGRKHKDNVKFYYQKWMEE 584
DT+LTHDS SVRKTH GRKHKDNV+ +YQKWME+
Sbjct: 10 DTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMED 44
>AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical
protein Y41G9A.5 protein.
Length = 402
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -1
Query: 560 NNSGIQSR-QNXSKSIWQQRHCNTTTLGSFGNGTRRTPTSCTRWSSRYDTSSIYGSWRSY 384
+++G++ + N W +R +GN +WSS+Y + Y S Y
Sbjct: 2 SHTGMKDKGMNDINPRWFRRQYGWAGSPYYGNAQYYETQPQQQWSSQYQNNQNYYSPYFY 61
Query: 383 GTTNDDGSTWANAANDGNETAYDGP 309
G + TW N+ + +T Y+ P
Sbjct: 62 GYQHQ--QTWQNSNQNQYQTLYNRP 84
>AC006816-2|AAK85508.1| 352|Caenorhabditis elegans Hypothetical
protein Y71D11A.3a protein.
Length = 352
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 221 LLLFVHRWSIHKWRSHL-SHWSHW 289
++LFVH W +H W L +W W
Sbjct: 180 VVLFVHPWDMHMWDGRLDKYWMPW 203
>AC006816-1|AAN39661.1| 401|Caenorhabditis elegans Hypothetical
protein Y71D11A.3b protein.
Length = 401
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 221 LLLFVHRWSIHKWRSHL-SHWSHW 289
++LFVH W +H W L +W W
Sbjct: 229 VVLFVHPWDMHMWDGRLDKYWMPW 252
>AB071420-1|BAB86940.1| 401|Caenorhabditis elegans
2-amino-3-carboxylmuconate-6-semialdehydedecarboxylase
protein.
Length = 401
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 221 LLLFVHRWSIHKWRSHL-SHWSHW 289
++LFVH W +H W L +W W
Sbjct: 229 VVLFVHPWDMHMWDGRLDKYWMPW 252
>AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical
protein T12B5.3 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 39 INKLSS*ICNSQWKNFSVFILPMLLKHNTL--ITKLTHIYEYK 161
+ K C QWKN F P +L HN I +L H+ +K
Sbjct: 182 LKKFERLACLEQWKNAKTFETPWVLVHNCQIPIEQLFHLERFK 224
>AC024842-6|AAY86285.1| 215|Caenorhabditis elegans Hypothetical
protein Y59H11AR.5 protein.
Length = 215
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/80 (25%), Positives = 29/80 (36%)
Frame = -1
Query: 554 SGIQSRQNXSKSIWQQRHCNTTTLGSFGNGTRRTPTSCTRWSSRYDTSSIYGSWRSYGTT 375
SG+Q+++ S Q + GS G +RT S+Y + W +
Sbjct: 107 SGVQNQREISYVTQQALGTMSQGSGSIWIGAKRTTLCKASRLSKYCNTLTSFQWTDGSAS 166
Query: 374 NDDGSTWANAANDGNETAYD 315
DG W N D N D
Sbjct: 167 GLDGLIWNNNQPDNNYNRTD 186
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -1
Query: 428 SRYDTSSIYGSWRSYGTTNDDGSTWANAAN-DGNETAYDG 312
S + ++ YG+ S+GT ++DG++W + N +GN + G
Sbjct: 241 SNNNNNNNYGN--SWGTNDNDGNSWKGSGNSNGNSDNWGG 278
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -1
Query: 428 SRYDTSSIYGSWRSYGTTNDDGSTWANAAN-DGNETAYDG 312
S + ++ YG+ S+GT ++DG++W + N +GN + G
Sbjct: 241 SNNNNNNNYGN--SWGTNDNDGNSWKGSGNSNGNSDNWGG 278
>Z82093-5|CAB05016.3| 192|Caenorhabditis elegans Hypothetical
protein ZK39.6 protein.
Length = 192
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = -1
Query: 482 GSFGNGTRRTPTSCTRWSSRYDTSSIYGSWRSYGTTNDDGSTWANAANDGNE 327
GSF G R T T+ + T + SW T DG W D ++
Sbjct: 86 GSFWIGAHRITTCMTQIITAQCTPTNSFSWTDNSATRTDGFVWETQQPDNSD 137
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 641 HRKKT*RQCEVLLSEMDGGTSTTXHXCNNSGIQSRQNXSKSIWQQ 507
HR +T C L S DGG + +N+ +S N +S+ Q
Sbjct: 13 HRTQTTSVCNHLFSPGDGGPTFAPQRDSNTSSRSSSNAKESVLMQ 57
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 641 HRKKT*RQCEVLLSEMDGGTSTTXHXCNNSGIQSRQNXSKSIWQQ 507
HR +T C L S DGG + +N+ +S N +S+ Q
Sbjct: 13 HRTQTTSVCNHLFSPGDGGPTFAPQRDSNTSSRSSSNAKESVLMQ 57
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 479 SFGNGTRRTPTSCTRWSSRYDTSSIYGSWRSYGTTNDDGST 357
S G+ TP S S+ D S++ GS S G+TN+ GST
Sbjct: 747 SASTGSTNTPGSTE--STITDGSTVSGSTGSTGSTNNPGST 785
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,595,668
Number of Sequences: 27780
Number of extensions: 212727
Number of successful extensions: 673
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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