Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_J16
(728 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0017 + 18937774-18937864,18938505-18940945 278 4e-75
04_01_0103 + 1082077-1082167,1083037-1085477 275 2e-74
01_06_0662 + 30987187-30987277,30987825-30990214 248 3e-66
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 248 3e-66
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 189 2e-48
03_05_0511 + 25056018-25059107 108 5e-24
02_04_0148 - 20198407-20201424 100 1e-21
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 54 2e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 49 3e-06
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 38 0.011
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 37 0.019
01_04_0109 + 16112581-16112934 32 0.41
04_01_0330 - 4369326-4370852 30 2.2
09_06_0142 - 21107878-21109104 28 6.6
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353... 28 8.7
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 278 bits (681), Expect = 4e-75
Identities = 127/184 (69%), Positives = 148/184 (80%)
Frame = -3
Query: 726 VDCSKGVQYLNEIKDSVVXGFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQII 547
VD KGVQYLNEIKDSVV GFQWA KEG +AEEN+RG+ F DV LH DAIHRGGGQ+I
Sbjct: 648 VDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVI 707
Query: 546 PTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMF 367
PT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE Q GTP++
Sbjct: 708 PTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLY 767
Query: 366 IVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRK 187
+KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ DP E S+ +VQ+ RKRK
Sbjct: 768 NIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRK 827
Query: 186 GLKE 175
GLKE
Sbjct: 828 GLKE 831
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 275 bits (675), Expect = 2e-74
Identities = 126/184 (68%), Positives = 147/184 (79%)
Frame = -3
Query: 726 VDCSKGVQYLNEIKDSVVXGFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQII 547
VD KGVQYLNEIKDSVV GFQWA KEG +AEEN+RG+ F DV LH DAIHRGGGQ+I
Sbjct: 648 VDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVI 707
Query: 546 PTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMF 367
PT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE Q GTP++
Sbjct: 708 PTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLY 767
Query: 366 IVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRK 187
+KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ DP E S+ +V + RKRK
Sbjct: 768 NIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRK 827
Query: 186 GLKE 175
GLKE
Sbjct: 828 GLKE 831
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 248 bits (608), Expect = 3e-66
Identities = 117/170 (68%), Positives = 136/170 (80%), Gaps = 2/170 (1%)
Frame = -3
Query: 726 VDCSKGVQYLNEIKDSVVXGFQWAXKEGVMAEENLRG--VRFNXYDVTLHTDAIHRGGGQ 553
VD KGVQYLNEIKDSVV GFQWA KEG +AEEN+RG + F DV LH+DAIHRGGGQ
Sbjct: 644 VDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHSDAIHRGGGQ 703
Query: 552 IIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTP 373
IIPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIY VLN++RGHVFEE Q GTP
Sbjct: 704 IIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTP 763
Query: 372 MFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSK 223
++ +KAYLPV ESFGFT+ LR+ T GQAFP VFDHW++L DP EP ++
Sbjct: 764 LYNIKAYLPVIESFGFTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTR 813
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 248 bits (607), Expect = 3e-66
Identities = 113/184 (61%), Positives = 138/184 (75%)
Frame = -3
Query: 726 VDCSKGVQYLNEIKDSVVXGFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQII 547
VD KGVQYL+EIKDSVV GFQWA KEG +AEEN+RGV F DVTLH+D+IHRGGGQ+I
Sbjct: 658 VDMCKGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELCDVTLHSDSIHRGGGQLI 717
Query: 546 PTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMF 367
PT RR +YA LTA PRLMEP+Y +IQ P+ AVG +YGVLN R G + EES+ GTP+
Sbjct: 718 PTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLS 777
Query: 366 IVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRK 187
++ YLPV +SF FT LR+ T GQAFPQC+F HWQ + DP + S+ V+ + RKRK
Sbjct: 778 NLRFYLPVAKSFDFTEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRK 837
Query: 186 GLKE 175
GLK+
Sbjct: 838 GLKD 841
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 189 bits (460), Expect = 2e-48
Identities = 94/187 (50%), Positives = 120/187 (64%), Gaps = 12/187 (6%)
Frame = -3
Query: 699 LNEIKDSVVXGFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTTRRCLYA 520
LN +KDS+V GFQW +EG + +E +R V+F + + + +HRGGGQIIPT RR +Y+
Sbjct: 783 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHRGGGQIIPTARRVVYS 842
Query: 519 CLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 340
L A PRLMEPVY EIQ P V IY VL+RRRGHV + GTP+++VKA+LPV
Sbjct: 843 AFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVKAFLPVI 902
Query: 339 ESFGFTADLRSNTGGQAFPQCVFDHWQVLPGD---------PCEP---QSKPYNVVQETR 196
ESFGF DLR +T GQAF VFDHW ++PGD P EP Q + +TR
Sbjct: 903 ESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFMVKTR 962
Query: 195 KRKGLKE 175
+RKG+ E
Sbjct: 963 RRKGMSE 969
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 108 bits (259), Expect = 5e-24
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Frame = -3
Query: 690 IKDSVVXGFQWAXKEGVMAEENLRGVRF--NXYDVTLHTDAIHRG------GGQIIPTTR 535
+++ +V GFQ A G + +E + G+ F Y H+DA + GQ+I +
Sbjct: 815 LRNCIVSGFQLATNAGPLCDEPMWGLVFVVEPYIFCDHSDAANHSEQYNIFSGQVITAVK 874
Query: 534 RCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKA 355
++ +PRL+E +Y CE+ P +G Y VL+R+R V +E GT +F V A
Sbjct: 875 EACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEGTSLFTVHA 934
Query: 354 YLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 241
YLPV ES GF+ +LRS T G A V HW+ +P DP
Sbjct: 935 YLPVAESVGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 100 bits (240), Expect = 1e-21
Identities = 58/159 (36%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Frame = -3
Query: 690 IKDSVVXGFQWAXKEGVMAEENLRGVRF--NXYDVTLHTDAIHRGG-------GQIIPTT 538
+K+S+ GFQ A G + E G+ F Y + DA + GQII
Sbjct: 790 VKNSIATGFQLATNAGPLCGEPTWGLIFLVKPYILPDSADASNNQSDHYSTFSGQIITAV 849
Query: 537 RRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 358
R A +L ++PRL+EP+Y CE+ P +G +Y VL R V +E GT +F V
Sbjct: 850 REACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEGTSLFTVH 909
Query: 357 AYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 241
AYL V ES F+ LR+ T G A F HW+ +P DP
Sbjct: 910 AYLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948
>04_04_0640 - 26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 53.6 bits (123), Expect = 2e-07
Identities = 45/155 (29%), Positives = 67/155 (43%)
Frame = -3
Query: 714 KGVQYLNEIKDSVVXGFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTTR 535
KG E V+ G + + GV+A + +R D + H QI R
Sbjct: 580 KGGAVPKEYVPGVMKGIEESLPNGVLAGYPVVDLRAVLVDGSYHDVDSSVLAFQI--AAR 637
Query: 534 RCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKA 355
L A PRL+EP+ E+ PE +G + G LN RRG V G + +V A
Sbjct: 638 GAFREGLRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDA 696
Query: 354 YLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 250
++P+ E F + + LR T G+A + V+P
Sbjct: 697 FVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVP 731
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Frame = -3
Query: 681 SVVXGFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTTRRCLYA---CLL 511
++ GF+ A G + + +R + L A H + +YA C
Sbjct: 613 AIEKGFKEACNSGSLIGHPVENIR-----IVLTDGASHAVDSSELAFKLASIYAFRQCYA 667
Query: 510 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 331
A+P ++EPV E++ P G + G +N+R+G + Q +V ++P+N F
Sbjct: 668 AARPVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLNNMF 725
Query: 330 GFTADLRSNTGGQ 292
G++ LRS T G+
Sbjct: 726 GYSTALRSMTQGK 738
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = -3
Query: 510 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 331
T +L EP + ++ PE +G + +L +RRG + + ++K +P
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLI 556
Query: 330 GFTADLRSNTGGQAFPQCVFDHWQVLPGD 244
G + + + G A +FD + GD
Sbjct: 557 GLRNAVLTASRGTAILNTIFDSYGPWAGD 585
>11_06_0768 +
27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -1
Query: 338 SRSVLLPICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGKD 183
S S +P +P P D PS+ +T G S+ +N SP+ +Y K G D
Sbjct: 19 STSARVPGVIPKPIDLPSQRGTATQGDKSMPPASNAWGSPSVMYPKNGGGSD 70
>01_04_0109 + 16112581-16112934
Length = 117
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -1
Query: 341 MSRSVLLP--ICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGK 186
M+ VL P + +P+PA R R+ +T R++ +++ R PTT +R +G+
Sbjct: 1 MATEVLRPHNVLLPSPAQRRIRATAATHQRTANNHQSDARTKPTTAGSRRRQGR 54
>04_01_0330 - 4369326-4370852
Length = 508
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 542 VGMIWPPPLWMASVWSVTS 598
+G IWPPP+W S TS
Sbjct: 487 IGKIWPPPVWFKRCTSATS 505
>09_06_0142 - 21107878-21109104
Length = 408
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 217 VGLALRFARVSREDLPMVEYALREGLS-AGVGTQIGSKTER 336
V L L++ E LP++ A REG++ AGV +GS R
Sbjct: 171 VDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASR 211
>10_01_0323 +
3530246-3530446,3531091-3531726,3531860-3532018,
3532276-3532569,3557747-3557941,3558875-3559095,
3559190-3559373,3559797-3559973,3561319-3561824,
3561880-3562060
Length = 917
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 592 YIIXVESNTTQILFSHNSFLXGPLESXHNRVLNFIEVLNSFGAIH 726
Y I + I+ S+N L G LES H+R L+ V A+H
Sbjct: 644 YAINIAHRRVDIMDSNNYNLIGTLESDHHRALSKRIVKRLSDALH 688
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,855,973
Number of Sequences: 37544
Number of extensions: 468479
Number of successful extensions: 1234
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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