Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_J16
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 341 4e-94
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 341 4e-94
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 180 1e-45
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 180 1e-45
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 75 7e-14
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 30 1.5
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 30 1.9
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 29 4.5
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 5.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 341 bits (837), Expect = 4e-94
Identities = 153/187 (81%), Positives = 169/187 (90%)
Frame = -3
Query: 726 VDCSKGVQYLNEIKDSVVXGFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQII 547
+D +KGVQYLNEIKDSVV GFQWA +EGV+++EN+RGVRFN +DVTLH DAIHRGGGQII
Sbjct: 657 MDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQII 716
Query: 546 PTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMF 367
PT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVFEESQV GTPMF
Sbjct: 717 PTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMF 776
Query: 366 IVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRK 187
+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP E +KP +V +TRKRK
Sbjct: 777 VVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRK 836
Query: 186 GLKEGLP 166
GLKEG+P
Sbjct: 837 GLKEGVP 843
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 341 bits (837), Expect = 4e-94
Identities = 153/187 (81%), Positives = 169/187 (90%)
Frame = -3
Query: 726 VDCSKGVQYLNEIKDSVVXGFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQII 547
+D +KGVQYLNEIKDSVV GFQWA +EGV+++EN+RGVRFN +DVTLH DAIHRGGGQII
Sbjct: 657 MDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQII 716
Query: 546 PTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMF 367
PT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVFEESQV GTPMF
Sbjct: 717 PTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMF 776
Query: 366 IVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRK 187
+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP E +KP +V +TRKRK
Sbjct: 777 VVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRK 836
Query: 186 GLKEGLP 166
GLKEG+P
Sbjct: 837 GLKEGVP 843
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 180 bits (437), Expect = 1e-45
Identities = 85/187 (45%), Positives = 119/187 (63%), Gaps = 12/187 (6%)
Frame = -3
Query: 699 LNEIKDSVVXGFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTTRRCLYA 520
L+ +++S+V GFQWA +EG + EE +R V+F D + T+ ++RGGGQ+IPT RRC Y+
Sbjct: 763 LSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYS 822
Query: 519 CLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 340
L A PRLMEP Y E+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV
Sbjct: 823 AFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVM 882
Query: 339 ESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEP---------QSKPY---NVVQETR 196
+SFGF DLR +T GQAF F HWQ++PGDP + Q P+ + +TR
Sbjct: 883 DSFGFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTR 942
Query: 195 KRKGLKE 175
+RKGL E
Sbjct: 943 RRKGLSE 949
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 180 bits (437), Expect = 1e-45
Identities = 85/187 (45%), Positives = 119/187 (63%), Gaps = 12/187 (6%)
Frame = -3
Query: 699 LNEIKDSVVXGFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTTRRCLYA 520
L+ +++S+V GFQWA +EG + EE +R V+F D + T+ ++RGGGQ+IPT RRC Y+
Sbjct: 638 LSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYS 697
Query: 519 CLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 340
L A PRLMEP Y E+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV
Sbjct: 698 AFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVM 757
Query: 339 ESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEP---------QSKPY---NVVQETR 196
+SFGF DLR +T GQAF F HWQ++PGDP + Q P+ + +TR
Sbjct: 758 DSFGFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTR 817
Query: 195 KRKGLKE 175
+RKGL E
Sbjct: 818 RRKGLSE 824
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein
K10C3.5a protein.
Length = 894
Score = 74.5 bits (175), Expect = 7e-14
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Frame = -3
Query: 681 SVVXGFQWAXKEGVMAEENLRGVRF--NXYDVTLHTDAIHRGGGQIIPTTRRCLYACLLT 508
++V GF+ G + E + G+ ++V AI GGQ++ + A
Sbjct: 693 ALVAGFELFCNTGPLCNEIMHGIAVIVEEWNVDEEDGAI---GGQMMTAIKASCSAAAKK 749
Query: 507 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 328
RL+ +Y C + A+G ++ VL++R+ V E T +F V + +PV ESF
Sbjct: 750 LALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFS 809
Query: 327 FTADLRSNTGGQAFPQCVFDHWQVLPGDP 241
F LR T G A Q F HWQV+ DP
Sbjct: 810 FCDQLRKFTSGMASAQLQFSHWQVIDEDP 838
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/55 (43%), Positives = 28/55 (50%)
Frame = -3
Query: 405 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 241
V E T +F V + +PV ESF F LR T G A Q F HWQV+ DP
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/119 (24%), Positives = 51/119 (42%)
Frame = -3
Query: 648 EGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCE 469
EG + + + G+ D + H A+ +I T + + A L+EP+ E
Sbjct: 593 EGPLIKSRIAGIHVRIQDGSTH--AVDSTEIAMINTMQNMMRESFEKANWLLLEPIMKVE 650
Query: 468 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQ 292
P G + L +R + G I +A P+++ FG+T++LRS T G+
Sbjct: 651 ATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELRSLTEGK 707
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = -3
Query: 561 GGQIIPT-----TRRCLYACLLTAQPRLMEPVYLCEIQCP-EVAVGGIYGVLNRRRGHVF 400
GG+I P ++C+ L + + L EPV +I+ + I L RRR H
Sbjct: 565 GGKINPALLSACAQKCVSEALSSGEMVLTEPVMEVQIEIRNDDPTQPILNELLRRRAHFE 624
Query: 399 EESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 295
T + + A LP++E+ + +R+ T G
Sbjct: 625 HSDATESTEIRRICAILPLSETENLSKTVRTLTSG 659
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 17 LLSHLRVCFNMMRNMCC*K*TCVKRFPYRYVFLICFNYVV 136
+L+ LR+C+ C + TC K FP ++V L+ ++VV
Sbjct: 290 ILTPLRICYTSCLFQHC-QITCQKNFPTKFVDLLSLSHVV 328
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 250 REDLPMVEYALREGLSAGVGTQIGSKTERLID 345
+ED+ +EY + E ++ +GTQ+ KT +D
Sbjct: 232 QEDVTRIEYLIHEYQNSDIGTQMLKKTRTAVD 263
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 561 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRR 415
G Q + T RCL A +L + +M + + + A G ++ ++NR+
Sbjct: 1017 GDQTVDKTFRCLMAMMLCCEGIIMSAQFFPQFVGAKSAAGQMFNLINRQ 1065
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,460,517
Number of Sequences: 27780
Number of extensions: 389273
Number of successful extensions: 954
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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