Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_J15
(555 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 148 5e-37
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 134 1e-32
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 106 2e-24
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 69 4e-13
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 37 0.002
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 35 0.009
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 34 0.016
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 33 0.037
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 33 0.037
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 31 0.11
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 30 0.20
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 28 0.80
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 28 1.1
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 27 1.4
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 27 1.9
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 27 2.5
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 26 3.2
SPBC19F8.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.5
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 9.9
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 148 bits (359), Expect = 5e-37
Identities = 63/132 (47%), Positives = 95/132 (71%)
Frame = -3
Query: 484 LGSNVEEVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELH 305
+G NVE V ++N+ F +WD+GGQ +R W Y+ N++ +I V+DS DR+R+ + EEL
Sbjct: 49 IGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQ 108
Query: 304 RMLVHEELSKACLLVFANKQDVKGSMTAAEISEQLDLTSIKQHPWHIQACCALTGEGLHL 125
RML +EL A LLVFANKQD+ +M AAEI+++L L S++ W+IQA CA +G+GL+
Sbjct: 109 RMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRHRQWYIQATCATSGDGLYE 168
Query: 124 GLEWIASRIKKK 89
GLEW+++ +K +
Sbjct: 169 GLEWLSTNLKNQ 180
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 134 bits (323), Expect = 1e-32
Identities = 57/132 (43%), Positives = 88/132 (66%)
Frame = -3
Query: 484 LGSNVEEVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELH 305
+G NVE V +KN++F +WD+GGQ +R W Y+T ++ +I V+DS D R+ +R+ELH
Sbjct: 53 VGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELH 112
Query: 304 RMLVHEELSKACLLVFANKQDVKGSMTAAEISEQLDLTSIKQHPWHIQACCALTGEGLHL 125
R++ E+ LLV ANKQD+ G+++ A+I++ L L +K W++Q CALTG+GL
Sbjct: 113 RIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLE 172
Query: 124 GLEWIASRIKKK 89
GL W++ K K
Sbjct: 173 GLAWLSQNAKLK 184
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 106 bits (254), Expect = 2e-24
Identities = 49/130 (37%), Positives = 80/130 (61%)
Frame = -3
Query: 481 GSNVEEVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHR 302
G + + + LRF +WD+GGQ++LR+ W Y+ ++E +I V+DS D RL R L
Sbjct: 49 GFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQE 108
Query: 301 MLVHEELSKACLLVFANKQDVKGSMTAAEISEQLDLTSIKQHPWHIQACCALTGEGLHLG 122
+LV E+L +LV ANK DV G++++ EIS+ L+++ K W I + ALTG +
Sbjct: 109 LLVEEKLLFTSILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDA 168
Query: 121 LEWIASRIKK 92
+ W+A+ +K+
Sbjct: 169 ISWLANDLKE 178
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 69.3 bits (162), Expect = 4e-13
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Frame = -3
Query: 469 EEVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVH 290
EE+ N+RF +DLGG Q R W Y+ ++ ++D D +RL S+ EL +L
Sbjct: 57 EELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAM 116
Query: 289 EELSKACLLVFANKQDVKGSMTAAEISEQLDL--TSIKQ--------HPWHIQACCALTG 140
EEL++ L+ NK D G+++ E+ L L T+ K P + C +
Sbjct: 117 EELARVPFLILGNKIDAPGAISEDELKAALGLYQTTGKGVSKPVPGIRPIEVFMCSVVLR 176
Query: 139 EGLHLGLEWIASRI 98
+G G +W+A +
Sbjct: 177 QGYGEGFKWLAQYV 190
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 36.7 bits (81), Expect = 0.002
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = -3
Query: 466 EVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHE 287
E+ K ++ +WD GQ+ R+ ++YY + +I+V D TD+ ++ L + +
Sbjct: 51 ELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA 110
Query: 286 ELSKACLLVFANKQDV 239
LLV NK D+
Sbjct: 111 VEGVNRLLV-GNKSDM 125
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 34.7 bits (76), Expect = 0.009
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -3
Query: 454 KNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEEL-- 281
K ++ +WD GQ+ RS YY + ++V D T++ S EEL L
Sbjct: 60 KRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKD----SFEELSSWLSDIRAMA 115
Query: 280 -SKACLLVFANKQDVK 236
S C+++ +K D++
Sbjct: 116 PSTICVVLAGSKSDLQ 131
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 33.9 bits (74), Expect = 0.016
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -3
Query: 466 EVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQ 335
E+ K ++ +WD GQ+ R+ YY + ++++ D TD++
Sbjct: 52 ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKK 95
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 32.7 bits (71), Expect = 0.037
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = -3
Query: 454 KNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSK 275
+ +R +WD GQ+ RS +Y +S I+V D T+ ++ E+ + E
Sbjct: 58 RTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSF-VNTEKWIEDVRAERGDD 116
Query: 274 ACLLVFANKQDV 239
+++ NK D+
Sbjct: 117 VIIVLVGNKTDL 128
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 32.7 bits (71), Expect = 0.037
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = -3
Query: 454 KNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSK 275
K ++ +WD GQ+ R+ + YY + ++V D T + L + H + S
Sbjct: 57 KKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHAD-SN 115
Query: 274 ACLLVFANKQDV 239
+++ NK D+
Sbjct: 116 IVIMLVGNKTDL 127
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 31.1 bits (67), Expect = 0.11
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = -3
Query: 451 NLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKA 272
+++ +WD GQ+ +S YY N+ I+V D T L ++ + + L +
Sbjct: 63 SVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWI-KELQRQAPEGI 121
Query: 271 CLLVFANKQDVKGSMTAAE 215
+ + NK D+ A E
Sbjct: 122 VIALAGNKLDLAQERRAVE 140
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 30.3 bits (65), Expect = 0.20
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Frame = -3
Query: 529 QYVFNTTHYREFK*ILGSN--VEEVVW--KNLRFVMWDLGGQQSLRSAWNTYYTNSEFVI 362
Q+V N RE+K +G++ ++VV K + +WD GQ+ +S +Y ++ +
Sbjct: 27 QFV-NQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCV 85
Query: 361 MVIDSTDRQRLGISREELHRMLVHEELSKAC---LLVFANKQDVKGSMTAAEISEQLDLT 191
+V + + + S E + +++ C ++ N+ D S A + LD
Sbjct: 86 IVYNVNNSKSFD-SVENWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAVSLHRALDYC 144
Query: 190 SIK 182
K
Sbjct: 145 KSK 147
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 28.3 bits (60), Expect = 0.80
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 442 FVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDR 338
F +WD GQ+ L + YY + I++ D T R
Sbjct: 60 FNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSR 94
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 27.9 bits (59), Expect = 1.1
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 451 NLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELS 278
+L+ M+D+GGQ++ R W + N +I + D + R R + E +S
Sbjct: 191 HLQIRMFDVGGQRTERRKWIYCFENVNSIIFCVSLNDYDKKLYERAAPERNRLVESIS 248
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 27.5 bits (58), Expect = 1.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 421 GQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELH 305
G S+ S + T TNS+ V+ D+TD +S+ EL+
Sbjct: 520 GYSSVTSGYGT--TNSKKVVASYDNTDDNEYSVSKSELY 556
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 27.1 bits (57), Expect = 1.9
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = -3
Query: 529 QYVFNTTHYREFK*ILGSN--VEEVVW--KNLRFVMWDLGGQQSLRSAWNTYYTNSEFVI 362
QYV N +++K +G++ +EV+ K + +WD GQ+ +S +Y ++ +
Sbjct: 27 QYV-NRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCV 85
Query: 361 MVID 350
+V D
Sbjct: 86 LVYD 89
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 26.6 bits (56), Expect = 2.5
Identities = 25/133 (18%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Frame = -3
Query: 481 GSNVEEVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHR 302
G + E + + +D+GGQ+S R W + N ++ ++ + + ++
Sbjct: 223 GISEETFLLNRHHYRFFDVGGQRSERRKWIHCFENVTALLFLVSLAGYDQCLVEDNSGNQ 282
Query: 301 M----LVHEEL------SKACLLVFANKQDV-KGSMTAAEISEQL-DLTSIKQHPWHIQA 158
M L+ + + S++ +++F NK D+ K + + I + D + P +Q
Sbjct: 283 MQEALLLWDSICNSSWFSESAMILFLNKLDLFKRKVHISPIQKHFPDYQEVGSTPTFVQT 342
Query: 157 CCALTGEGLHLGL 119
C L + G+
Sbjct: 343 QCPLADNAVRSGM 355
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 26.2 bits (55), Expect = 3.2
Identities = 25/98 (25%), Positives = 43/98 (43%)
Frame = -3
Query: 466 EVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHE 287
EV +++ +WD GQ+ Y +S +++ L +E+ ++H
Sbjct: 48 EVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHF 107
Query: 286 ELSKACLLVFANKQDVKGSMTAAEISEQLDLTSIKQHP 173
S LLV A K D++ +I E+L T+ QHP
Sbjct: 108 CSSLPILLV-ACKADLRND---PKIIEELSKTN--QHP 139
>SPBC19F8.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 218
Score = 25.0 bits (52), Expect = 7.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 253 NKQDVKGSMTAAEISEQLDLTSIKQH 176
+K+D E E+ D+TSIKQH
Sbjct: 170 SKRDGDNMRLFIETEEEADMTSIKQH 195
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 24.6 bits (51), Expect = 9.9
Identities = 11/27 (40%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 505 YREFK*ILGSNVEEVV-WKNLRFVMWD 428
Y++FK ++ SN+E +V KN R+ ++D
Sbjct: 1325 YKKFKDVISSNLEFIVEIKNTRWKLFD 1351
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,158,691
Number of Sequences: 5004
Number of extensions: 41942
Number of successful extensions: 120
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 231978230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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