BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_J13
(800 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075459-1|AAL68272.1| 417|Drosophila melanogaster RE15159p pro... 52 7e-07
AE014134-2956|AAF53688.2| 417|Drosophila melanogaster CG31751-P... 52 7e-07
AE014134-2955|AAF53686.2| 417|Drosophila melanogaster CG31751-P... 52 7e-07
BT015309-1|AAT94537.1| 880|Drosophila melanogaster AT07233p pro... 29 7.4
AY089511-1|AAL90249.1| 560|Drosophila melanogaster GH21034p pro... 29 7.4
AE013599-494|AAN16139.1| 529|Drosophila melanogaster CG30497-PC... 29 7.4
AE013599-493|AAF59198.3| 560|Drosophila melanogaster CG30497-PB... 29 7.4
AE013599-492|AAF59197.3| 877|Drosophila melanogaster CG30497-PA... 29 7.4
AE014297-1133|AAF54518.1| 1436|Drosophila melanogaster CG11872-P... 29 9.8
>AY075459-1|AAL68272.1| 417|Drosophila melanogaster RE15159p
protein.
Length = 417
Score = 52.4 bits (120), Expect = 7e-07
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = -1
Query: 800 YXVTRRLPDEEYRLLKTLISARLVQSLILGAYTLXQDPKNTYVTSTEKANGWELLRKIRK 621
Y + + E LLK ++AR VQSL++G YT P N Y+ T++ GW+LL+K+ +
Sbjct: 336 YTSLNPIENSELALLKYCVTARFVQSLVMGLYTHTLHPTNEYLLVTQE-KGWKLLQKLWR 394
Query: 620 TKPTENGDPTD--WKAIANEFLTRS 552
E+ D D W + +++LT+S
Sbjct: 395 ----ESFDDIDELWASTGHQYLTQS 415
>AE014134-2956|AAF53688.2| 417|Drosophila melanogaster CG31751-PB,
isoform B protein.
Length = 417
Score = 52.4 bits (120), Expect = 7e-07
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = -1
Query: 800 YXVTRRLPDEEYRLLKTLISARLVQSLILGAYTLXQDPKNTYVTSTEKANGWELLRKIRK 621
Y + + E LLK ++AR VQSL++G YT P N Y+ T++ GW+LL+K+ +
Sbjct: 336 YTSLNPIENSELALLKYCVTARFVQSLVMGLYTHTLHPTNEYLLVTQE-KGWKLLQKLWR 394
Query: 620 TKPTENGDPTD--WKAIANEFLTRS 552
E+ D D W + +++LT+S
Sbjct: 395 ----ESFDDIDELWASTGHQYLTQS 415
>AE014134-2955|AAF53686.2| 417|Drosophila melanogaster CG31751-PA,
isoform A protein.
Length = 417
Score = 52.4 bits (120), Expect = 7e-07
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = -1
Query: 800 YXVTRRLPDEEYRLLKTLISARLVQSLILGAYTLXQDPKNTYVTSTEKANGWELLRKIRK 621
Y + + E LLK ++AR VQSL++G YT P N Y+ T++ GW+LL+K+ +
Sbjct: 336 YTSLNPIENSELALLKYCVTARFVQSLVMGLYTHTLHPTNEYLLVTQE-KGWKLLQKLWR 394
Query: 620 TKPTENGDPTD--WKAIANEFLTRS 552
E+ D D W + +++LT+S
Sbjct: 395 ----ESFDDIDELWASTGHQYLTQS 415
>BT015309-1|AAT94537.1| 880|Drosophila melanogaster AT07233p
protein.
Length = 880
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 555 KLNKRKNNNIGNRWSIVSV*HEATNRKYCNKKFVFELKK 439
K+ K NNN G+RWS++S+ + K KFV +++
Sbjct: 532 KMVKVNNNNDGDRWSLISL-GNSPGHKNVELKFVDTMRR 569
>AY089511-1|AAL90249.1| 560|Drosophila melanogaster GH21034p
protein.
Length = 560
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 555 KLNKRKNNNIGNRWSIVSV*HEATNRKYCNKKFVFELKK 439
K+ K NNN G+RWS++S+ + K KFV +++
Sbjct: 212 KMVKVNNNNDGDRWSLISL-GNSPGHKNVELKFVDTMRR 249
>AE013599-494|AAN16139.1| 529|Drosophila melanogaster CG30497-PC,
isoform C protein.
Length = 529
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 555 KLNKRKNNNIGNRWSIVSV*HEATNRKYCNKKFVFELKK 439
K+ K NNN G+RWS++S+ + K KFV +++
Sbjct: 181 KMVKVNNNNDGDRWSLISL-GNSPGHKNVELKFVDTMRR 218
>AE013599-493|AAF59198.3| 560|Drosophila melanogaster CG30497-PB,
isoform B protein.
Length = 560
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 555 KLNKRKNNNIGNRWSIVSV*HEATNRKYCNKKFVFELKK 439
K+ K NNN G+RWS++S+ + K KFV +++
Sbjct: 212 KMVKVNNNNDGDRWSLISL-GNSPGHKNVELKFVDTMRR 249
>AE013599-492|AAF59197.3| 877|Drosophila melanogaster CG30497-PA,
isoform A protein.
Length = 877
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 555 KLNKRKNNNIGNRWSIVSV*HEATNRKYCNKKFVFELKK 439
K+ K NNN G+RWS++S+ + K KFV +++
Sbjct: 529 KMVKVNNNNDGDRWSLISL-GNSPGHKNVELKFVDTMRR 566
>AE014297-1133|AAF54518.1| 1436|Drosophila melanogaster CG11872-PA
protein.
Length = 1436
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 665 TEKANGWELLRKIRKTKPTENGDP 594
+EKA ++KI+K KPTE+ +P
Sbjct: 424 SEKAEETSTIKKIKKLKPTESNEP 447
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,201,907
Number of Sequences: 53049
Number of extensions: 648814
Number of successful extensions: 1498
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -