Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_J13
(800 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 25 0.82
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 2.5
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 4.4
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 4.4
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 4.4
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 4.4
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 4.4
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 4.4
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 4.4
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 4.4
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 4.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 4.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 4.4
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.8
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 5.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 5.8
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 7.6
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 7.6
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 22 7.6
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.82
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 215 SHKNSLIVTFELSYIYNNYKQKENINCKR 129
S+ NSL + + YNNY N N K+
Sbjct: 83 SNNNSLSNNYNYNNNYNNYNNNYNTNYKK 111
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.4 bits (48), Expect = 2.5
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +1
Query: 283 KKLNFTIKLLLYTSRLAYLG 342
K+ + +++++LY S AYLG
Sbjct: 517 KERDLSLRMILYFSEFAYLG 536
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 167 NNYKQKENINCKR 129
NNYK N NCK+
Sbjct: 94 NNYKYNYNNNCKK 106
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 27 LISNTNKLLPNFLRNNTTE*YGFYSFTTSY 116
+ISN N L N+ NN Y +++ Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 27 LISNTNKLLPNFLRNNTTE*YGFYSFTTSY 116
+ISN N L N+ NN Y +++ Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 27 LISNTNKLLPNFLRNNTTE*YGFYSFTTSY 116
+ISN N L N+ NN Y +++ Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 27 LISNTNKLLPNFLRNNTTE*YGFYSFTTSY 116
+ISN N L N+ NN Y +++ Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 27 LISNTNKLLPNFLRNNTTE*YGFYSFTTSY 116
+ISN N L N+ NN Y +++ Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 27 LISNTNKLLPNFLRNNTTE*YGFYSFTTSY 116
+ISN N L N+ NN Y +++ Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 27 LISNTNKLLPNFLRNNTTE*YGFYSFTTSY 116
+ISN N L N+ NN Y +++ Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 27 LISNTNKLLPNFLRNNTTE*YGFYSFTTSY 116
+ISN N L N+ NN Y +++ Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 27 LISNTNKLLPNFLRNNTTE*YGFYSFTTSY 116
+ISN N L N+ NN Y +++ Y
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 343
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 27 LISNTNKLLPNFLRNNTTE*YGFYSFTTSY 116
+ISN N L N+ NN Y +++ Y
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 343
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 27 LISNTNKLLPNFLRNNTTE*YGFYSFTTSY 116
+ISN N L N+ NN Y +++ Y
Sbjct: 81 IISNNNPLSNNYNYNNNYNNYNKHNYNKLY 110
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -1
Query: 335 YASRDVYNNNLIVKLSFLAS*SLKNNIYWRNKKNQL 228
Y++ +N N + F+ S NN++++ K+N L
Sbjct: 265 YSALSSHNLNYVNTEQFVKSQYQANNVHYQGKENIL 300
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 179 SYIYNNYKQKENINCKR 129
+Y NNY N NCK+
Sbjct: 337 NYNNNNYNNNYNNNCKK 353
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 7.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 43 INYYLTSYVTTLRNNM 90
IN Y +Y+ T+++NM
Sbjct: 39 INVYTKAYIYTIKSNM 54
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 7.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 471 NTFYWWLHVKRSQ 509
N FYW+ ++ RS+
Sbjct: 439 NVFYWFAYLSRSE 451
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.8 bits (44), Expect = 7.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 584 SSPWGLRSLWVSFS*SFGAVPIHSPSQWT*HTCFSGLV 697
S P RSL S+ S G P+ S S HT F G +
Sbjct: 55 SVPQPPRSLEGSYDSSSGDSPVSSHSSNGIHTGFGGSI 92
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,577
Number of Sequences: 438
Number of extensions: 4693
Number of successful extensions: 28
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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