Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_J12
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53336-2|AAA96175.1| 571|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z92817-6|CAB60324.1| 384|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z83111-7|CAB05534.2| 384|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z67755-6|CAA91759.1| 311|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81113-4|CAB03281.2| 388|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z69360-6|CAA93282.1| 599|Caenorhabditis elegans Hypothetical pr... 28 7.3
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 27 9.6
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 27 9.6
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 27 9.6
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 27 9.6
>U53336-2|AAA96175.1| 571|Caenorhabditis elegans Hypothetical
protein K07C11.4 protein.
Length = 571
Score = 29.5 bits (63), Expect = 2.4
Identities = 32/116 (27%), Positives = 46/116 (39%)
Frame = -2
Query: 673 NSNDMKVYENKMKGPAHGDELAYIFEPLDTEGKSMSGAVSDSDAKVRDNFVDLISKFAHS 494
+S K + +KGP H EL Y+F + G + +D D K + FV+ I F
Sbjct: 445 DSETTKDPTHPIKGPFHASELRYLF---NFNGMD-TIPFNDKDKKFENYFVNAIVNF--- 497
Query: 493 LNGEENNTKTNLMGLQPYSEENDQFLKINDGIKTDKGFRFCQMGLWGGMADRLTGA 326
+N +TK L S+ L +ND FR LW + GA
Sbjct: 498 INTGTPSTKALLWPAVSKSQPFANLL-LNDKPSVQTSFRQEAYELWQSDIAKTVGA 552
>Z92817-6|CAB60324.1| 384|Caenorhabditis elegans Hypothetical
protein F57G8.6 protein.
Length = 384
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -2
Query: 541 KVRDNFVDLISKFAHSLNGEENNTKTNLMGLQPYSEENDQFLKINDGIKTD 389
+++ + + + KF L+ + + +G+Q YS + +KIN+ I+ D
Sbjct: 301 RLQGDILKICEKFQEVLSNDLHEHYVKELGMQRYSGRLSKIMKINNAIQND 351
>Z83111-7|CAB05534.2| 384|Caenorhabditis elegans Hypothetical
protein F57G8.6 protein.
Length = 384
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -2
Query: 541 KVRDNFVDLISKFAHSLNGEENNTKTNLMGLQPYSEENDQFLKINDGIKTD 389
+++ + + + KF L+ + + +G+Q YS + +KIN+ I+ D
Sbjct: 301 RLQGDILKICEKFQEVLSNDLHEHYVKELGMQRYSGRLSKIMKINNAIQND 351
>Z67755-6|CAA91759.1| 311|Caenorhabditis elegans Hypothetical
protein F54F7.6 protein.
Length = 311
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 493 LNGEENNTKTNLMGLQPYSEENDQFLKI 410
L E+N+ +T+ L S+ NDQF KI
Sbjct: 254 LEAEQNDPETDTQALSDSSDSNDQFKKI 281
>Z81113-4|CAB03281.2| 388|Caenorhabditis elegans Hypothetical
protein T03F6.4 protein.
Length = 388
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +2
Query: 485 SIKAVREFGNEIYKVVP-NFSITVGYC---TTH*FSFGV 589
S + EF +YK +P NF+I V YC T+H S G+
Sbjct: 325 STVTIDEFRIAVYKTLPPNFAIPVPYCRFQTSHRTSMGI 363
>Z69360-6|CAA93282.1| 599|Caenorhabditis elegans Hypothetical
protein F25H8.6 protein.
Length = 599
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 664 DMKVYENKMKGPAHGDELAYIFEP--LDTEGKSMSGAVSDSDAKVRDNFVDLISKFAHSL 491
D+ V E++M GP GDE I E + E + S + + + + D ++ F H +
Sbjct: 446 DVSVNESQMAGPNVGDEEEEIMEEEVEEDENVEIEDDTSSASSSIDTDTCDAMASFIHFI 505
Query: 490 NGE 482
+
Sbjct: 506 GND 508
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +3
Query: 165 TSMFLFPPRLFNGSLFPPRLPNPKLFKGLSTGNLSTGKGIGNLDNKSPIKFLQRAPVSLS 344
+S + PP+ + LFP L S + + PI+F + P + S
Sbjct: 24 SSSSIGPPQQQSAKLFPEHFYPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTNS 83
Query: 345 AIPPHKPI--*QNLNPLSVLMPSLI 413
A+ +KP+ Q +P S ++P+ +
Sbjct: 84 ALEEYKPVPHVQVTSPKSSIVPNFV 108
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +3
Query: 165 TSMFLFPPRLFNGSLFPPRLPNPKLFKGLSTGNLSTGKGIGNLDNKSPIKFLQRAPVSLS 344
+S + PP+ + LFP L S + + PI+F + P + S
Sbjct: 3 SSSSIGPPQQQSAKLFPEHFYPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTNS 62
Query: 345 AIPPHKPI--*QNLNPLSVLMPSLI 413
A+ +KP+ Q +P S ++P+ +
Sbjct: 63 ALEEYKPVPHVQVTSPKSSIVPNFV 87
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +3
Query: 165 TSMFLFPPRLFNGSLFPPRLPNPKLFKGLSTGNLSTGKGIGNLDNKSPIKFLQRAPVSLS 344
+S + PP+ + LFP L S + + PI+F + P + S
Sbjct: 24 SSSSIGPPQQQSAKLFPEHFYPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTNS 83
Query: 345 AIPPHKPI--*QNLNPLSVLMPSLI 413
A+ +KP+ Q +P S ++P+ +
Sbjct: 84 ALEEYKPVPHVQVTSPKSSIVPNFV 108
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/94 (21%), Positives = 38/94 (40%)
Frame = -2
Query: 568 SGAVSDSDAKVRDNFVDLISKFAHSLNGEENNTKTNLMGLQPYSEENDQFLKINDGIKTD 389
+ A S DA+ R NF F ++ + + T N +S D+++ I+ I
Sbjct: 887 NNAASMQDARERQNFRGRTGSFYNTAAPQRDRTSYNSNRRPSHSRSQDEYVPIDSVIGRV 946
Query: 388 KGFRFCQMGLWGGMADRLTGALCKNLIGDLLSKL 287
+ + + W D T + +G+ S+L
Sbjct: 947 QVCHWSKWSEWSRCHDNSTRERKRFCVGEKGSEL 980
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,345,436
Number of Sequences: 27780
Number of extensions: 368004
Number of successful extensions: 1010
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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