BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_J09
(439 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542211-1|CAG47007.1| 103|Homo sapiens ATP5L protein. 109 3e-24
CR533494-1|CAG38525.1| 103|Homo sapiens ATP5L protein. 109 3e-24
BC070165-1|AAH70165.1| 103|Homo sapiens ATP synthase, H+ transp... 109 3e-24
AF092124-1|AAC61597.1| 103|Homo sapiens F1F0-type ATP synthase ... 109 3e-24
AF087846-1|AAP97159.1| 103|Homo sapiens F1Fo-ATP synthase compl... 109 3e-24
BC015128-1|AAH15128.1| 103|Homo sapiens ATP synthase, H+ transp... 108 9e-24
BC093721-1|AAH93721.1| 100|Homo sapiens ATP5L2 protein protein. 95 9e-20
BC093719-1|AAH93719.1| 100|Homo sapiens ATP5L2 protein protein. 95 9e-20
AF092923-1|AAP97217.1| 100|Homo sapiens F1Fo-ATP synthase compl... 95 9e-20
U45325-2|AAB08974.1| 443|Homo sapiens HKR3 protein. 29 7.0
U45325-1|AAB08973.1| 688|Homo sapiens Kruppel-related 3 protein. 29 7.0
L16896-1|AAA65124.1| 688|Homo sapiens zinc finger protein protein. 29 7.0
BC013573-1|AAH13573.1| 688|Homo sapiens zinc finger and BTB dom... 29 7.0
AL591866-11|CAI16079.1| 688|Homo sapiens zinc finger and BTB do... 29 7.0
>CR542211-1|CAG47007.1| 103|Homo sapiens ATP5L protein.
Length = 103
Score = 109 bits (263), Expect = 3e-24
Identities = 48/95 (50%), Positives = 68/95 (71%)
Frame = -2
Query: 324 VAKVPTLINTAITQARPKLNIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWKRQ 145
V K P L+N A+T ++P+L F YA+VEL PP +E+P+ Q + ++ SA+TG++K+
Sbjct: 9 VEKTPALVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPRAIQSLKKIVNSAQTGSFKQL 68
Query: 144 TVKEATLNVLVGAEVIFWFYIGECIGKRHLVGXDV 40
TVKEA LN LV EV+ WFY+GE IGKR ++G DV
Sbjct: 69 TVKEAVLNGLVATEVLMWFYVGEIIGKRGIIGYDV 103
>CR533494-1|CAG38525.1| 103|Homo sapiens ATP5L protein.
Length = 103
Score = 109 bits (263), Expect = 3e-24
Identities = 48/95 (50%), Positives = 68/95 (71%)
Frame = -2
Query: 324 VAKVPTLINTAITQARPKLNIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWKRQ 145
V K P L+N A+T ++P+L F YA+VEL PP +E+P+ Q + ++ SA+TG++K+
Sbjct: 9 VEKTPALVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPRAIQSLKKIVNSAQTGSFKQL 68
Query: 144 TVKEATLNVLVGAEVIFWFYIGECIGKRHLVGXDV 40
TVKEA LN LV EV+ WFY+GE IGKR ++G DV
Sbjct: 69 TVKEAVLNGLVATEVLMWFYVGEIIGKRGIIGYDV 103
>BC070165-1|AAH70165.1| 103|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit G
protein.
Length = 103
Score = 109 bits (263), Expect = 3e-24
Identities = 48/95 (50%), Positives = 68/95 (71%)
Frame = -2
Query: 324 VAKVPTLINTAITQARPKLNIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWKRQ 145
V K P L+N A+T ++P+L F YA+VEL PP +E+P+ Q + ++ SA+TG++K+
Sbjct: 9 VEKTPALVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPRAIQSLKKIVNSAQTGSFKQL 68
Query: 144 TVKEATLNVLVGAEVIFWFYIGECIGKRHLVGXDV 40
TVKEA LN LV EV+ WFY+GE IGKR ++G DV
Sbjct: 69 TVKEAVLNGLVATEVLMWFYVGEIIGKRGIIGYDV 103
>AF092124-1|AAC61597.1| 103|Homo sapiens F1F0-type ATP synthase
subunit g protein.
Length = 103
Score = 109 bits (263), Expect = 3e-24
Identities = 48/95 (50%), Positives = 68/95 (71%)
Frame = -2
Query: 324 VAKVPTLINTAITQARPKLNIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWKRQ 145
V K P L+N A+T ++P+L F YA+VEL PP +E+P+ Q + ++ SA+TG++K+
Sbjct: 9 VEKTPALVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPKAIQSLKKIVNSAQTGSFKQL 68
Query: 144 TVKEATLNVLVGAEVIFWFYIGECIGKRHLVGXDV 40
TVKEA LN LV EV+ WFY+GE IGKR ++G DV
Sbjct: 69 TVKEAVLNGLVATEVLMWFYVGEIIGKRGIIGYDV 103
>AF087846-1|AAP97159.1| 103|Homo sapiens F1Fo-ATP synthase complex
Fo membrane domain g subunit protein.
Length = 103
Score = 109 bits (263), Expect = 3e-24
Identities = 48/95 (50%), Positives = 68/95 (71%)
Frame = -2
Query: 324 VAKVPTLINTAITQARPKLNIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWKRQ 145
V K P L+N A+T ++P+L F YA+VEL PP +E+P+ Q + ++ SA+TG++K+
Sbjct: 9 VEKTPALVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPRAIQSLKKIVNSAQTGSFKQL 68
Query: 144 TVKEATLNVLVGAEVIFWFYIGECIGKRHLVGXDV 40
TVKEA LN LV EV+ WFY+GE IGKR ++G DV
Sbjct: 69 TVKEAVLNGLVATEVLMWFYVGEIIGKRGIIGYDV 103
>BC015128-1|AAH15128.1| 103|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit G
protein.
Length = 103
Score = 108 bits (259), Expect = 9e-24
Identities = 48/95 (50%), Positives = 67/95 (70%)
Frame = -2
Query: 324 VAKVPTLINTAITQARPKLNIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWKRQ 145
V K P L+N A+T ++P+L F YA+VEL PP +E+P+ Q + + SA+TG++K+
Sbjct: 9 VEKTPALVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPRAIQSLKKIANSAQTGSFKQL 68
Query: 144 TVKEATLNVLVGAEVIFWFYIGECIGKRHLVGXDV 40
TVKEA LN LV EV+ WFY+GE IGKR ++G DV
Sbjct: 69 TVKEAVLNGLVATEVLMWFYVGEIIGKRGIIGYDV 103
>BC093721-1|AAH93721.1| 100|Homo sapiens ATP5L2 protein protein.
Length = 100
Score = 95.1 bits (226), Expect = 9e-20
Identities = 43/92 (46%), Positives = 61/92 (66%)
Frame = -2
Query: 324 VAKVPTLINTAITQARPKLNIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWKRQ 145
V K P L+N A+T +P+L F Y VEL PP +E+P+ Q + +++SA+TG++K+
Sbjct: 9 VEKTPALVNAAVTYLKPRLAAFWYYTTVELVPPTPAEIPRAIQSLKKIVSSAQTGSFKQL 68
Query: 144 TVKEATLNVLVGAEVIFWFYIGECIGKRHLVG 49
TVKEA LN LV EV WFY+ E GKR ++G
Sbjct: 69 TVKEALLNGLVATEVSTWFYVREITGKRGIIG 100
>BC093719-1|AAH93719.1| 100|Homo sapiens ATP5L2 protein protein.
Length = 100
Score = 95.1 bits (226), Expect = 9e-20
Identities = 43/92 (46%), Positives = 61/92 (66%)
Frame = -2
Query: 324 VAKVPTLINTAITQARPKLNIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWKRQ 145
V K P L+N A+T +P+L F Y VEL PP +E+P+ Q + +++SA+TG++K+
Sbjct: 9 VEKTPALVNAAVTYLKPRLAAFWYYTTVELVPPTPAEIPRAIQSLKKIVSSAQTGSFKQL 68
Query: 144 TVKEATLNVLVGAEVIFWFYIGECIGKRHLVG 49
TVKEA LN LV EV WFY+ E GKR ++G
Sbjct: 69 TVKEALLNGLVATEVSTWFYVREITGKRGIIG 100
>AF092923-1|AAP97217.1| 100|Homo sapiens F1Fo-ATP synthase complex
Fo membrane domain g subunit protein.
Length = 100
Score = 95.1 bits (226), Expect = 9e-20
Identities = 43/92 (46%), Positives = 61/92 (66%)
Frame = -2
Query: 324 VAKVPTLINTAITQARPKLNIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWKRQ 145
V K P L+N A+T +P+L F Y VEL PP +E+P+ Q + +++SA+TG++K+
Sbjct: 9 VEKTPALVNAAVTYLKPRLAAFWYYTTVELVPPTPAEIPRAIQSLKKIVSSAQTGSFKQL 68
Query: 144 TVKEATLNVLVGAEVIFWFYIGECIGKRHLVG 49
TVKEA LN LV EV WFY+ E GKR ++G
Sbjct: 69 TVKEALLNGLVATEVSTWFYVREITGKRGIIG 100
>U45325-2|AAB08974.1| 443|Homo sapiens HKR3 protein.
Length = 443
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 12 TDLFLNSKFKHRXQQGAVC-QCIHQCRTRR*LQL 110
T+L L+ FKHR ++ VC +C H+ +R LQ+
Sbjct: 175 TELQLHEAFKHRGEKLFVCEECGHRASSRNGLQM 208
>U45325-1|AAB08973.1| 688|Homo sapiens Kruppel-related 3 protein.
Length = 688
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 12 TDLFLNSKFKHRXQQGAVC-QCIHQCRTRR*LQL 110
T+L L+ FKHR ++ VC +C H+ +R LQ+
Sbjct: 420 TELQLHEAFKHRGEKLFVCEECGHRASSRNGLQM 453
>L16896-1|AAA65124.1| 688|Homo sapiens zinc finger protein protein.
Length = 688
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 12 TDLFLNSKFKHRXQQGAVC-QCIHQCRTRR*LQL 110
T+L L+ FKHR ++ VC +C H+ +R LQ+
Sbjct: 420 TELQLHEAFKHRGEKLFVCEECGHRASSRNGLQM 453
>BC013573-1|AAH13573.1| 688|Homo sapiens zinc finger and BTB domain
containing 48 protein.
Length = 688
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 12 TDLFLNSKFKHRXQQGAVC-QCIHQCRTRR*LQL 110
T+L L+ FKHR ++ VC +C H+ +R LQ+
Sbjct: 420 TELQLHEAFKHRGEKLFVCEECGHRASSRNGLQM 453
>AL591866-11|CAI16079.1| 688|Homo sapiens zinc finger and BTB
domain containing 48 protein.
Length = 688
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 12 TDLFLNSKFKHRXQQGAVC-QCIHQCRTRR*LQL 110
T+L L+ FKHR ++ VC +C H+ +R LQ+
Sbjct: 420 TELQLHEAFKHRGEKLFVCEECGHRASSRNGLQM 453
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,856,854
Number of Sequences: 237096
Number of extensions: 923296
Number of successful extensions: 1349
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -