Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_J07
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   1.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.7  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   4.7  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   4.7  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   6.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   8.2  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = -1

Query: 551  KERYGDLRPELPSQRPQRQIRQAHTKEGF-QIRKQIRQAPEEGRR 420
            +E+ G+ RP +PS  P+   R+A+ +    ++R++ RQ  ++ RR
Sbjct: 1067 EEQCGE-RPSMPSSSPRTSERRANIRARMARLRQRHRQHQQDERR 1110


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 14/57 (24%), Positives = 30/57 (52%)
 Frame = -2

Query: 460 YENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEV 290
           Y N+    + K  + + + +L +++K++   +E  KEKK +  K    +   KE+E+
Sbjct: 239 YHNEKEAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGK-MTREMAKKEQEI 294


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 472 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKP 341
           +++  E K  +L++K AE       K  KKKE   ++ED+++ P
Sbjct: 30  RIADEEAKQRELERKRAEGESDFGRKK-KKKEIRYDDEDEDEGP 72


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = -2

Query: 631 IKRVCKDYHXRIARLEDXKFDLEYIVKRKDMEISDLN---SQVNDLRGKFVKPTLKKVSK 461
           +K+VC  YH  +    +   + E +++     I DL     Q  D R + +    K+V  
Sbjct: 228 VKKVCAGYHASLYPCPNEYNEREEMLRGVRTRIEDLKMVLGQTQDQRQRVLLNVAKEVPN 287

Query: 460 YE 455
           +E
Sbjct: 288 WE 289


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = -1

Query: 530 RPELPSQRPQRQ----IRQAHTKEGFQIRKQIRQAPE 432
           RP+  + RP RQ    +     K  +Q+ KQIR+APE
Sbjct: 235 RPQ--TTRPNRQDIIEVTSFTGKMWYQVYKQIREAPE 269


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -1

Query: 518 PSQRPQRQIRQAHTKEGFQIRKQIRQAPEEGRRIQ 414
           P Q+ QRQ +Q H +   Q ++Q +Q  ++ ++ Q
Sbjct: 217 PQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQ 251


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 248  TNCQ*L-CDVPYSVSVCKET*ILFIWLLALCLCVSK 144
            TNC    C+ P+SV     + ++ + +  LC C SK
Sbjct: 1147 TNCHSSGCERPFSVQKIPNSNLILLVVDVLCPCGSK 1182


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,452
Number of Sequences: 2352
Number of extensions: 9880
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)