BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_J06
(672 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051642-1|AAK93066.1| 474|Drosophila melanogaster GM14163p pro... 346 2e-95
AE014134-1038|AAF52334.1| 474|Drosophila melanogaster CG9140-PA... 346 2e-95
BT016162-1|AAV37047.1| 702|Drosophila melanogaster AT08270p pro... 283 2e-76
AE013599-2521|AAF57825.3| 702|Drosophila melanogaster CG11423-P... 283 2e-76
AY089293-1|AAL90031.1| 462|Drosophila melanogaster AT08706p pro... 177 8e-45
AE013599-2034|AAF58152.1| 481|Drosophila melanogaster CG8102-PA... 177 1e-44
AE013599-2033|AAM68529.1| 462|Drosophila melanogaster CG8102-PB... 177 1e-44
BT029095-1|ABJ17028.1| 554|Drosophila melanogaster IP13321p pro... 34 0.20
AE014298-745|AAF46035.1| 554|Drosophila melanogaster CG15784-PA... 34 0.20
D84437-1|BAA12663.1| 855|Drosophila melanogaster fruitless prot... 32 0.82
BT024450-1|ABC86512.1| 960|Drosophila melanogaster GH19932p pro... 32 0.82
AF220177-1|AAG28588.1| 956|Drosophila melanogaster fruitless ty... 32 0.82
AF220176-1|AAG28587.1| 855|Drosophila melanogaster fruitless ty... 32 0.82
AE014297-2538|AAS65176.1| 854|Drosophila melanogaster CG14307-P... 32 0.82
AE014297-2537|AAS65175.1| 854|Drosophila melanogaster CG14307-P... 32 0.82
AE014297-2536|AAF55565.2| 854|Drosophila melanogaster CG14307-P... 32 0.82
AE014297-2535|AAS65174.1| 906|Drosophila melanogaster CG14307-P... 32 0.82
AE014297-2534|AAS65173.1| 870|Drosophila melanogaster CG14307-P... 32 0.82
AE014297-2533|AAN13776.1| 955|Drosophila melanogaster CG14307-P... 32 0.82
X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr... 29 4.4
AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P... 29 4.4
AF145634-1|AAD38609.1| 696|Drosophila melanogaster BcDNA.GH0619... 29 7.6
AE013599-1752|AAF58349.1| 717|Drosophila melanogaster CG6191-PA... 29 7.6
>AY051642-1|AAK93066.1| 474|Drosophila melanogaster GM14163p
protein.
Length = 474
Score = 346 bits (850), Expect = 2e-95
Identities = 153/176 (86%), Positives = 165/176 (93%)
Frame = -3
Query: 670 FNISGHVNTPCTVEEEMSIPLKELIERHAGGVTGGWDNLXAIIPGGSSTPLIPKNVCETV 491
FNISGHVN PCTVEEEMSIPLKELIERH GGVTGGWDNL +IPGGSSTP+IPKNVC+ V
Sbjct: 291 FNISGHVNRPCTVEEEMSIPLKELIERHCGGVTGGWDNLLGVIPGGSSTPIIPKNVCDDV 350
Query: 490 LMDFDGLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKI 311
+MDFDGL+AAQTSLGTAAIIVMDKSTD++KAIARLI FYKHESCGQCTPCREG+ WMNKI
Sbjct: 351 IMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGWMNKI 410
Query: 310 IYRFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQ 143
+ RFV G+A P EIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPE+E+RMQ
Sbjct: 411 MTRFVKGDAQPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQ 466
>AE014134-1038|AAF52334.1| 474|Drosophila melanogaster CG9140-PA
protein.
Length = 474
Score = 346 bits (850), Expect = 2e-95
Identities = 153/176 (86%), Positives = 165/176 (93%)
Frame = -3
Query: 670 FNISGHVNTPCTVEEEMSIPLKELIERHAGGVTGGWDNLXAIIPGGSSTPLIPKNVCETV 491
FNISGHVN PCTVEEEMSIPLKELIERH GGVTGGWDNL +IPGGSSTP+IPKNVC+ V
Sbjct: 291 FNISGHVNRPCTVEEEMSIPLKELIERHCGGVTGGWDNLLGVIPGGSSTPIIPKNVCDDV 350
Query: 490 LMDFDGLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKI 311
+MDFDGL+AAQTSLGTAAIIVMDKSTD++KAIARLI FYKHESCGQCTPCREG+ WMNKI
Sbjct: 351 IMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGWMNKI 410
Query: 310 IYRFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQ 143
+ RFV G+A P EIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPE+E+RMQ
Sbjct: 411 MTRFVKGDAQPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQ 466
>BT016162-1|AAV37047.1| 702|Drosophila melanogaster AT08270p protein.
Length = 702
Score = 283 bits (693), Expect = 2e-76
Identities = 130/190 (68%), Positives = 155/190 (81%)
Frame = -3
Query: 670 FNISGHVNTPCTVEEEMSIPLKELIERHAGGVTGGWDNLXAIIPGGSSTPLIPKNVCETV 491
FNISGHV PCTVEEEMS+P +ELIERHAGGV GGWDNL AIIPGGSSTP I K +
Sbjct: 499 FNISGHVCNPCTVEEEMSMPTRELIERHAGGVIGGWDNLLAIIPGGSSTPCITKEHASSA 558
Query: 490 LMDFDGLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKI 311
+ D+DGL+A ++S+GT A+IVM+K TDI+KAIARL FYKHESCGQCTPCREG+ W+N I
Sbjct: 559 IHDYDGLMAVRSSMGTGALIVMNKDTDIIKAIARLSAFYKHESCGQCTPCREGLHWVNMI 618
Query: 310 IYRFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSA 131
++RFV G A EIDML+E++KQIEGHTICAL DGAAWP QGLIR+FRP +E R+++ A
Sbjct: 619 MHRFVTGQAQIAEIDMLFELTKQIEGHTICALADGAAWPPQGLIRNFRPVIEERIKK-RA 677
Query: 130 AHGPSKAERL 101
A +KAE L
Sbjct: 678 AEDQAKAEAL 687
>AE013599-2521|AAF57825.3| 702|Drosophila melanogaster CG11423-PA
protein.
Length = 702
Score = 283 bits (693), Expect = 2e-76
Identities = 130/190 (68%), Positives = 155/190 (81%)
Frame = -3
Query: 670 FNISGHVNTPCTVEEEMSIPLKELIERHAGGVTGGWDNLXAIIPGGSSTPLIPKNVCETV 491
FNISGHV PCTVEEEMS+P +ELIERHAGGV GGWDNL AIIPGGSSTP I K +
Sbjct: 499 FNISGHVCNPCTVEEEMSMPTRELIERHAGGVIGGWDNLLAIIPGGSSTPCITKEHASSA 558
Query: 490 LMDFDGLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKI 311
+ D+DGL+A ++S+GT A+IVM+K TDI+KAIARL FYKHESCGQCTPCREG+ W+N I
Sbjct: 559 IHDYDGLMAVRSSMGTGALIVMNKDTDIIKAIARLSAFYKHESCGQCTPCREGLHWVNMI 618
Query: 310 IYRFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSA 131
++RFV G A EIDML+E++KQIEGHTICAL DGAAWP QGLIR+FRP +E R+++ A
Sbjct: 619 MHRFVTGQAQIAEIDMLFELTKQIEGHTICALADGAAWPPQGLIRNFRPVIEERIKK-RA 677
Query: 130 AHGPSKAERL 101
A +KAE L
Sbjct: 678 AEDQAKAEAL 687
>AY089293-1|AAL90031.1| 462|Drosophila melanogaster AT08706p
protein.
Length = 462
Score = 177 bits (432), Expect = 8e-45
Identities = 86/178 (48%), Positives = 110/178 (61%), Gaps = 1/178 (0%)
Frame = -3
Query: 664 ISGHVNTPCTVEEEMSIPLKELIERHAGGVTGGWDNLXAIIPGGSSTPLIPKNVCETVLM 485
+SG VN PCTVEEEMSIPLK+LIERHAGGV GGWDNL A+ PGG STPL+ + VLM
Sbjct: 282 LSGQVNNPCTVEEEMSIPLKDLIERHAGGVKGGWDNLAAVFPGGLSTPLLDPSTAGKVLM 341
Query: 484 DFDGLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 305
DFD L A + G A+IVM K D + + R I F++ +C QC+ CR+G W+ +I
Sbjct: 342 DFDSLTDAGSGFGCGAVIVMTKDCDPLAIMLRSIQFFEKHTCKQCSYCRDGAIWLPEIFA 401
Query: 304 RFVDGNASPKEIDMLWEIS-KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYS 134
RFV G P EID I+ K ICAL + L+R F ++E R+ +Y+
Sbjct: 402 RFVKGQTHPHEIDWTLVIADKMRNSKPICALAYSQVSVAESLVRMFSRQIEERLLKYA 459
>AE013599-2034|AAF58152.1| 481|Drosophila melanogaster CG8102-PA,
isoform A protein.
Length = 481
Score = 177 bits (431), Expect = 1e-44
Identities = 86/178 (48%), Positives = 110/178 (61%), Gaps = 1/178 (0%)
Frame = -3
Query: 664 ISGHVNTPCTVEEEMSIPLKELIERHAGGVTGGWDNLXAIIPGGSSTPLIPKNVCETVLM 485
+SG VN PCTVEEEMSIPLK+LIERHAGGV GGWDNL A+ PGG STPL+ + VLM
Sbjct: 301 LSGQVNNPCTVEEEMSIPLKDLIERHAGGVKGGWDNLAAVFPGGLSTPLLDPSTAGKVLM 360
Query: 484 DFDGLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 305
DFD L A + G A+IVM K D + + R I F++ +C QC+ CR+G W+ +I
Sbjct: 361 DFDSLTDAGSGFGCGAVIVMTKDCDPLAIMLRSIQFFEKHTCKQCSYCRDGAIWLPEIFA 420
Query: 304 RFVDGNASPKEIDMLWEIS-KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYS 134
RFV G P EID I+ K ICAL + L+R F ++E R+ +Y+
Sbjct: 421 RFVKGQTHPHEIDWTLVIADKMRNSKPICALAYSQVSVAESLVRMFSRKIEERLLKYA 478
>AE013599-2033|AAM68529.1| 462|Drosophila melanogaster CG8102-PB,
isoform B protein.
Length = 462
Score = 177 bits (431), Expect = 1e-44
Identities = 86/178 (48%), Positives = 110/178 (61%), Gaps = 1/178 (0%)
Frame = -3
Query: 664 ISGHVNTPCTVEEEMSIPLKELIERHAGGVTGGWDNLXAIIPGGSSTPLIPKNVCETVLM 485
+SG VN PCTVEEEMSIPLK+LIERHAGGV GGWDNL A+ PGG STPL+ + VLM
Sbjct: 282 LSGQVNNPCTVEEEMSIPLKDLIERHAGGVKGGWDNLAAVFPGGLSTPLLDPSTAGKVLM 341
Query: 484 DFDGLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 305
DFD L A + G A+IVM K D + + R I F++ +C QC+ CR+G W+ +I
Sbjct: 342 DFDSLTDAGSGFGCGAVIVMTKDCDPLAIMLRSIQFFEKHTCKQCSYCRDGAIWLPEIFA 401
Query: 304 RFVDGNASPKEIDMLWEIS-KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYS 134
RFV G P EID I+ K ICAL + L+R F ++E R+ +Y+
Sbjct: 402 RFVKGQTHPHEIDWTLVIADKMRNSKPICALAYSQVSVAESLVRMFSRKIEERLLKYA 459
>BT029095-1|ABJ17028.1| 554|Drosophila melanogaster IP13321p
protein.
Length = 554
Score = 33.9 bits (74), Expect = 0.20
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 449 GHGSHHCHGQVN*HREGHRSTHHVLQARVLRPVHSLP 339
GHG H HG+ + H+ GH HH RP H P
Sbjct: 187 GHGFGHKHGRKHGHKHGHGPHHHGRHGHHGRPHHHHP 223
>AE014298-745|AAF46035.1| 554|Drosophila melanogaster CG15784-PA
protein.
Length = 554
Score = 33.9 bits (74), Expect = 0.20
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 449 GHGSHHCHGQVN*HREGHRSTHHVLQARVLRPVHSLP 339
GHG H HG+ + H+ GH HH RP H P
Sbjct: 187 GHGFGHKHGRKHGHKHGHGPHHHGRHGHHGRPHHHHP 223
>D84437-1|BAA12663.1| 855|Drosophila melanogaster fruitless protein
protein.
Length = 855
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 389 THHVLQARVLRPVHSLPRRCLLDEQDYIQIRRW*CFT-ERNRHAVGNFETNRRAHD 225
T H LQA R H+ ++ LD+ D I R CF + +RH + N R HD
Sbjct: 486 TQHALQAADARDEHNDAKQLQLDQTDNID-GRVKCFNIKHDRHPDRELDRNHREHD 540
>BT024450-1|ABC86512.1| 960|Drosophila melanogaster GH19932p
protein.
Length = 960
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 389 THHVLQARVLRPVHSLPRRCLLDEQDYIQIRRW*CFT-ERNRHAVGNFETNRRAHD 225
T H LQA R H+ ++ LD+ D I R CF + +RH + N R HD
Sbjct: 592 TQHALQAADARDEHNDAKQLQLDQTDNID-GRVKCFNIKHDRHPDRELDRNHREHD 646
>AF220177-1|AAG28588.1| 956|Drosophila melanogaster fruitless
type-A protein.
Length = 956
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 389 THHVLQARVLRPVHSLPRRCLLDEQDYIQIRRW*CFT-ERNRHAVGNFETNRRAHD 225
T H LQA R H+ ++ LD+ D I R CF + +RH + N R HD
Sbjct: 587 TQHALQAADARDEHNDAKQLQLDQTDNID-GRVKCFNIKHDRHPDRELDRNHREHD 641
>AF220176-1|AAG28587.1| 855|Drosophila melanogaster fruitless
type-A protein.
Length = 855
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 389 THHVLQARVLRPVHSLPRRCLLDEQDYIQIRRW*CFT-ERNRHAVGNFETNRRAHD 225
T H LQA R H+ ++ LD+ D I R CF + +RH + N R HD
Sbjct: 486 TQHALQAADARDEHNDAKQLQLDQTDNID-GRVKCFNIKHDRHPDRELDRNHREHD 540
>AE014297-2538|AAS65176.1| 854|Drosophila melanogaster CG14307-PM,
isoform M protein.
Length = 854
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 389 THHVLQARVLRPVHSLPRRCLLDEQDYIQIRRW*CFT-ERNRHAVGNFETNRRAHD 225
T H LQA R H+ ++ LD+ D I R CF + +RH + N R HD
Sbjct: 486 TQHALQAADARDEHNDAKQLQLDQTDNID-GRVKCFNIKHDRHPDRELDRNHREHD 540
>AE014297-2537|AAS65175.1| 854|Drosophila melanogaster CG14307-PL,
isoform L protein.
Length = 854
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 389 THHVLQARVLRPVHSLPRRCLLDEQDYIQIRRW*CFT-ERNRHAVGNFETNRRAHD 225
T H LQA R H+ ++ LD+ D I R CF + +RH + N R HD
Sbjct: 486 TQHALQAADARDEHNDAKQLQLDQTDNID-GRVKCFNIKHDRHPDRELDRNHREHD 540
>AE014297-2536|AAF55565.2| 854|Drosophila melanogaster CG14307-PC,
isoform C protein.
Length = 854
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 389 THHVLQARVLRPVHSLPRRCLLDEQDYIQIRRW*CFT-ERNRHAVGNFETNRRAHD 225
T H LQA R H+ ++ LD+ D I R CF + +RH + N R HD
Sbjct: 486 TQHALQAADARDEHNDAKQLQLDQTDNID-GRVKCFNIKHDRHPDRELDRNHREHD 540
>AE014297-2535|AAS65174.1| 906|Drosophila melanogaster CG14307-PJ,
isoform J protein.
Length = 906
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 389 THHVLQARVLRPVHSLPRRCLLDEQDYIQIRRW*CFT-ERNRHAVGNFETNRRAHD 225
T H LQA R H+ ++ LD+ D I R CF + +RH + N R HD
Sbjct: 538 TQHALQAADARDEHNDAKQLQLDQTDNID-GRVKCFNIKHDRHPDRELDRNHREHD 592
>AE014297-2534|AAS65173.1| 870|Drosophila melanogaster CG14307-PI,
isoform I protein.
Length = 870
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 389 THHVLQARVLRPVHSLPRRCLLDEQDYIQIRRW*CFT-ERNRHAVGNFETNRRAHD 225
T H LQA R H+ ++ LD+ D I R CF + +RH + N R HD
Sbjct: 502 TQHALQAADARDEHNDAKQLQLDQTDNID-GRVKCFNIKHDRHPDRELDRNHREHD 556
>AE014297-2533|AAN13776.1| 955|Drosophila melanogaster CG14307-PE,
isoform E protein.
Length = 955
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 389 THHVLQARVLRPVHSLPRRCLLDEQDYIQIRRW*CFT-ERNRHAVGNFETNRRAHD 225
T H LQA R H+ ++ LD+ D I R CF + +RH + N R HD
Sbjct: 587 TQHALQAADARDEHNDAKQLQLDQTDNID-GRVKCFNIKHDRHPDRELDRNHREHD 641
>X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein
protein.
Length = 2175
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/85 (21%), Positives = 32/85 (37%)
Frame = -2
Query: 635 RGGGDEHPAQGAH*EARGRSHRRXGQPXRHHTRRLLDPAHTQERLRDSVDGLRRSSSRAD 456
+ G + ++ AH + + ++ +HH ++ L H + G +S+ A
Sbjct: 653 KNGASDALSEDAHHQQQQHHQQQHQHQQQHHQQQHLHQQHHHHLQQQPNSG--SNSNPAS 710
Query: 455 LPGHGSHHCHGQVN*HREGHRSTHH 381
H HH HG H HH
Sbjct: 711 NDHHHGHHLHGHGLLHPSSAHHLHH 735
>AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA,
isoform A protein.
Length = 2175
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/85 (21%), Positives = 32/85 (37%)
Frame = -2
Query: 635 RGGGDEHPAQGAH*EARGRSHRRXGQPXRHHTRRLLDPAHTQERLRDSVDGLRRSSSRAD 456
+ G + ++ AH + + ++ +HH ++ L H + G +S+ A
Sbjct: 653 KNGASDALSEDAHHQQQQHHQQQHQHQQQHHQQQHLHQQHHHHLQQQPNSG--SNSNPAS 710
Query: 455 LPGHGSHHCHGQVN*HREGHRSTHH 381
H HH HG H HH
Sbjct: 711 NDHHHGHHLHGHGLLHPSSAHHLHH 735
>AF145634-1|AAD38609.1| 696|Drosophila melanogaster BcDNA.GH06193
protein.
Length = 696
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 449 GHGSHHCHGQVN*HREGHRSTHHVLQAR 366
G G H H Q + H+ H +THH Q R
Sbjct: 56 GSGGFHPHYQQHHHQRSHSATHHNHQKR 83
>AE013599-1752|AAF58349.1| 717|Drosophila melanogaster CG6191-PA
protein.
Length = 717
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 449 GHGSHHCHGQVN*HREGHRSTHHVLQAR 366
G G H H Q + H+ H +THH Q R
Sbjct: 56 GSGGFHPHYQQHHHQRSHSATHHNHQKR 83
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,767,023
Number of Sequences: 53049
Number of extensions: 703398
Number of successful extensions: 3337
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3285
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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