Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_J03
         (634 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0330 - 22376394-22376505,22376609-22376744,22376835-223769...    29   3.1  
09_06_0057 - 20567754-20568089,20568841-20569188,20569294-20569434     27   9.4  

>09_06_0330 -
           22376394-22376505,22376609-22376744,22376835-22376942,
           22377056-22377152,22377490-22377594,22377699-22377884,
           22378312-22378371,22378545-22378781
          Length = 346

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 538 EYICDISVTYRRAALHTYGIKQILLYIP 621
           +++CDI   YR   +H+YG+  + L+ P
Sbjct: 244 QFLCDICKFYRDWHVHSYGVDALFLHDP 271


>09_06_0057 - 20567754-20568089,20568841-20569188,20569294-20569434
          Length = 274

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 72  IHNHIDISTQYISLNKISYLKYYLSSKTLTVLI 170
           +H H  IS  ++ L+ I+ L+YY+  K L V++
Sbjct: 133 LHVHCHISGGHVLLDLIAGLRYYIFRKELPVVL 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,199,179
Number of Sequences: 37544
Number of extensions: 217110
Number of successful extensions: 344
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)