Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_J02
         (659 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   307   7e-86
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    71   7e-15

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  307 bits (753), Expect = 7e-86
 Identities = 141/174 (81%), Positives = 154/174 (88%)
 Frame = -1

Query: 659 DDHFLFKEGDRFXQAANACRXWPTGRGXYHNENKTFLVWCNEEDHLRIISMQMGGDLQQV 480
           DDHFLFKEGDRF QAANACR WPTGRG YHN++KTFLVWCNEEDHLRIISMQMGGDL QV
Sbjct: 182 DDHFLFKEGDRFLQAANACRFWPTGRGIYHNDDKTFLVWCNEEDHLRIISMQMGGDLGQV 241

Query: 479 YKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVAS 300
           Y+RLV AVNEIEK++ FSH+DRLGFLTFCPTNLGTTVRASVHI           LEE+A 
Sbjct: 242 YRRLVHAVNEIEKRLLFSHNDRLGFLTFCPTNLGTTVRASVHIKLPKLAANRAKLEEIAG 301

Query: 299 KYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEKSL 138
           K++LQVRGTRGEHTEAEGG+YDISNKRR+GLTEY AVKEM+DGIAELIK+EK L
Sbjct: 302 KFNLQVRGTRGEHTEAEGGIYDISNKRRLGLTEYQAVKEMHDGIAELIKLEKEL 355


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 71.3 bits (167), Expect = 7e-15
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = -1

Query: 659 DDHFLFKEGDRFXQAANACRXWPTGRGXYHNENKT 555
           DDHFLFKEGDRF QAANA R WPTGRG YHN++KT
Sbjct: 166 DDHFLFKEGDRFLQAANAXRFWPTGRGIYHNDDKT 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,072
Number of Sequences: 438
Number of extensions: 2336
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)