Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_J01
         (835 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-P...    29   5.9  
AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-P...    29   5.9  
AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-P...    29   5.9  

>AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-PC,
           isoform C protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +2

Query: 458 SSVLRPPRVQSSPFRCLQQ 514
           +S+ +PP+ QSSPF+ LQQ
Sbjct: 899 ASIFQPPQSQSSPFKMLQQ 917


>AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-PB,
           isoform B protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +2

Query: 458 SSVLRPPRVQSSPFRCLQQ 514
           +S+ +PP+ QSSPF+ LQQ
Sbjct: 899 ASIFQPPQSQSSPFKMLQQ 917


>AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-PA,
           isoform A protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +2

Query: 458 SSVLRPPRVQSSPFRCLQQ 514
           +S+ +PP+ QSSPF+ LQQ
Sbjct: 899 ASIFQPPQSQSSPFKMLQQ 917


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,334,381
Number of Sequences: 53049
Number of extensions: 650050
Number of successful extensions: 1764
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1764
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)