Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_I20
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-4|CAB01685.2|  531|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AF125952-4|AAD14698.1|  330|Caenorhabditis elegans Hypothetical ...    28   6.1  
AC006722-10|ABP57811.1|  330|Caenorhabditis elegans Hypothetical...    28   6.1  

>Z78417-4|CAB01685.2|  531|Caenorhabditis elegans Hypothetical
           protein C35C5.5 protein.
          Length = 531

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -2

Query: 108 IIYFTYLTXTRHATFGKWGKDGETL 34
           I YF Y   T    FG W  DGETL
Sbjct: 157 IKYFPYDWQTCEMKFGGWSNDGETL 181


>AF125952-4|AAD14698.1|  330|Caenorhabditis elegans Hypothetical
           protein C01B4.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +2

Query: 29  FHNVSPSFPHFPNVACR 79
           FH+ +P+F HFP+V+ R
Sbjct: 297 FHSAAPNFDHFPDVSLR 313


>AC006722-10|ABP57811.1|  330|Caenorhabditis elegans Hypothetical
           protein Y19D10A.16 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +2

Query: 29  FHNVSPSFPHFPNVACR 79
           FH+ +P+F HFP+V+ R
Sbjct: 297 FHSAAPNFDHFPDVSLR 313


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,013,221
Number of Sequences: 27780
Number of extensions: 251171
Number of successful extensions: 514
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)