Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_I17
(711 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288 50 1e-06
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 47 1e-05
12_01_1027 + 10529545-10529777,10530269-10530668 45 7e-05
12_01_1031 - 10605581-10606088,10606360-10606420,10606448-106064... 44 1e-04
01_01_0474 - 3488739-3488876,3488996-3489118,3489878-3489991,349... 44 1e-04
05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751 42 4e-04
05_01_0489 - 4077365-4077502,4078105-4078227,4079019-4079135,407... 42 5e-04
04_04_0598 - 26514226-26514545,26516080-26516302 42 6e-04
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 40 0.003
07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215 39 0.003
02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 39 0.003
03_06_0330 - 33178114-33178206,33178317-33178382,33179704-331798... 39 0.005
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 36 0.024
04_04_1248 - 32051679-32052356,32053617-32053778,32054147-320542... 36 0.032
04_04_0782 + 28038292-28038413,28038577-28038778,28039221-280392... 33 0.30
04_03_0975 - 21370715-21370877,21371227-21371319,21371383-213714... 32 0.39
01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 32 0.52
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 31 0.68
06_03_1048 + 27146475-27146652,27146739-27146804,27146880-271469... 31 1.2
02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 30 2.1
04_04_1575 + 34548774-34549109,34549979-34550185 29 2.8
02_01_0454 + 3263666-3265375 29 3.6
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 29 3.6
02_04_0285 - 21585048-21585173,21585302-21585355,21585512-21585952 28 8.4
>07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288
Length = 122
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 589
+KVD DE +++A +YN+ +MPTF+F+K+G + D+ GA D
Sbjct: 63 LKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKD 103
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/39 (46%), Positives = 30/39 (76%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
+KVD DE +A +N++S+P+F FV+NGK++D+ GA+
Sbjct: 694 LKVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGAD 732
>12_01_1027 + 10529545-10529777,10530269-10530668
Length = 210
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSM-PTFVFVKNGKKLDEFSGA 598
+K D DE E+IA Y++N + PTF FVK G+K+D GA
Sbjct: 39 LKFDIDELEEIADSYDVNGVVPTFTFVKAGQKIDMIQGA 77
>12_01_1031 - 10605581-10606088,10606360-10606420,10606448-10606491,
10606664-10608382,10609848-10610791
Length = 1091
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSM-PTFVFVKNGKKLDEFSGAN 595
V VD DE E + Y+I + PTF FVK+G+K+D+ GAN
Sbjct: 1033 VNVDSDELESVTDWYDIEGIVPTFFFVKDGEKIDKIPGAN 1072
>01_01_0474 -
3488739-3488876,3488996-3489118,3489878-3489991,
3490416-3490452,3490584-3490675,3490878-3490956,
3491640-3491734,3491858-3491991,3492560-3492833,
3493743-3494015,3494976-3495512
Length = 631
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -1
Query: 705 VDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
+D DE D +S ++I + PTF F+KNG+++D+ GAN
Sbjct: 580 IDVDELMDFSSSWDIRATPTFFFLKNGEQVDKLVGAN 616
>05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751
Length = 121
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 589
+KVD DE + IA ++++ +MPTF+F+K G D GA D
Sbjct: 69 LKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAMKD 109
>05_01_0489 -
4077365-4077502,4078105-4078227,4079019-4079135,
4079243-4079263
Length = 132
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -1
Query: 705 VDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
+D D+ D +S ++I + PTF F+KN K++D+ GAN
Sbjct: 81 IDVDDLMDFSSSWDIRATPTFFFIKNEKQVDKLVGAN 117
>04_04_0598 - 26514226-26514545,26516080-26516302
Length = 180
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 598
K++ DE DIAS+Y + S+PT + KNG+K D GA
Sbjct: 128 KLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGA 164
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
++V+ +E +I+ Y + ++P FVF+K GK +D GAN
Sbjct: 55 LRVEAEEQPEISEAYGVTAVPYFVFLKEGKTVDTLEGAN 93
>07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215
Length = 138
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 589
+KVD DE ++A + + +MPTFV + G+++ GA+ D
Sbjct: 78 LKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKD 118
>02_05_0085 -
25697860-25698142,25698631-25698946,25700481-25700518,
25700955-25701036,25701815-25702016
Length = 306
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 598
K++ DE DIA+++ I S+PT + KNG+K D GA
Sbjct: 161 KLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIGA 197
>03_06_0330 -
33178114-33178206,33178317-33178382,33179704-33179826,
33179930-33180067
Length = 139
Score = 38.7 bits (86), Expect = 0.005
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGKK 619
K+D DE ++A ++ + +MPTFV +K GK+
Sbjct: 80 KIDVDELSEVARQWKVEAMPTFVLIKGGKE 109
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 36.3 bits (80), Expect = 0.024
Identities = 10/31 (32%), Positives = 24/31 (77%)
Frame = -1
Query: 687 EDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
+++ ++Y++ + PTF+F+KN +++D+ G N
Sbjct: 700 QELVTQYDVRATPTFIFMKNNEEIDKLVGGN 730
>04_04_1248 -
32051679-32052356,32053617-32053778,32054147-32054269,
32054686-32054793
Length = 356
Score = 35.9 bits (79), Expect = 0.032
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = -1
Query: 705 VDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 589
VD D+ + ++S+ + +MPTF +K+ + +++ GAN D
Sbjct: 71 VDVDDVQSVSSKLGVKAMPTFFLIKDKEVVNKIVGANPD 109
>04_04_0782 +
28038292-28038413,28038577-28038778,28039221-28039246,
28039750-28039969
Length = 189
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSG 601
+ D DEC + NI PTF F ++G+K+DE G
Sbjct: 141 IYADIDECPETTQ--NIRYTPTFHFYRDGEKVDEMLG 175
>04_03_0975 -
21370715-21370877,21371227-21371319,21371383-21371466,
21371745-21371869,21372360-21372600,21373640-21373734
Length = 266
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSG 601
K+D D+ +A+ Y+I +PT + K+G+K +G
Sbjct: 70 KLDTDDYPQVATSYSIERIPTVLLFKDGEKTHSITG 105
>01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774
Length = 187
Score = 31.9 bits (69), Expect = 0.52
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 711 VKVDXDEC-EDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 589
+K+D ++ + +A E I +PTF +K+GK + E +GA +D
Sbjct: 134 LKLDCNQDNKSLAKELGIKVVPTFKILKDGKVVKEVTGAKLD 175
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDE 610
+KVD E +A N+ ++PTF KNG ++ E
Sbjct: 621 LKVDISESPAVARAENVRTVPTFKIYKNGTRVKE 654
>06_03_1048 +
27146475-27146652,27146739-27146804,27146880-27146975,
27147073-27147152,27148165-27148209,27148326-27148420,
27148623-27148632
Length = 189
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
V +D D S+ I S+PTF F G+K E GAN
Sbjct: 136 VDIDMDGVGSKLSDLKIFSVPTFHFYYQGRKTGEVVGAN 174
>02_01_0001 -
3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
7538-7667,7753-8255
Length = 577
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 598
KVD E D+A +Y++ PT +F +G D ++GA
Sbjct: 130 KVDATEDTDLAQKYDVQGFPTILFFIDGVPKD-YNGA 165
>04_04_1575 + 34548774-34549109,34549979-34550185
Length = 180
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKL 616
VK+D D + EY + +P+ + K+GK++
Sbjct: 121 VKIDHDANPQLIEEYKVYGLPSLILFKDGKEV 152
>02_01_0454 + 3263666-3265375
Length = 569
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 395 FCIPEAANTKKLISSNSLQTLKTF 466
FC+P A T LISSN L L+T+
Sbjct: 389 FCLPSKALTDDLISSNFLSWLQTY 412
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 705 VDXDECEDIASEYNINSMPTFVFVKNGKKLDE 610
+D D+ +D+A +Y ++ PT F G K E
Sbjct: 177 LDADKHKDLAEKYGVSGYPTLKFFPKGNKAGE 208
>02_04_0285 - 21585048-21585173,21585302-21585355,21585512-21585952
Length = 206
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 702 DXDECEDIASEYNINSMPTFVFVKNGKKLDEFS 604
+ DE ++A I +P F F KNG L+ F+
Sbjct: 151 EYDEQSEVADRLRIKVVPLFHFYKNGVLLEAFA 183
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,815,260
Number of Sequences: 37544
Number of extensions: 212852
Number of successful extensions: 341
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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