Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_I17
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 56 2e-08
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 48 5e-06
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 48 5e-06
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 48 5e-06
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 42 6e-04
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 42 6e-04
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 42 6e-04
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 41 8e-04
Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical pr... 37 0.016
U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical pr... 32 0.47
U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical pr... 32 0.47
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 31 0.61
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 31 0.61
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 29 2.5
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 29 2.5
Z54218-1|CAA90954.1| 315|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81486-6|CAB03988.2| 309|Caenorhabditis elegans Hypothetical pr... 28 5.7
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
+K+D DEC+ + EY INSMPTF+ + +G K D+FSGAN
Sbjct: 56 LKIDVDECDGVGEEYEINSMPTFLLIVDGIKKDQFSGAN 94
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 589
KVD DE ED+ S+Y++ MPTF+F KNG ++ G D
Sbjct: 63 KVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 102
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 589
KVD DE ED+ S+Y++ MPTF+F KNG ++ G D
Sbjct: 62 KVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 101
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 589
KVD DE ED+ S+Y++ MPTF+F KNG ++ G D
Sbjct: 62 KVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 101
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 589
KVD DE ED+ S+Y++ MPTF+F KNG ++ G D
Sbjct: 63 KVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 102
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
+KV+ D DI YNI++MPTF+F+KN +++D GAN
Sbjct: 57 LKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGAN 95
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
+KV+ D DI YNI++MPTF+F+KN +++D GAN
Sbjct: 57 LKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGAN 95
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
+KVD DEC A+ Y +N+MPTF+ NG+K GA+
Sbjct: 56 LKVDVDECRGTAATYGVNAMPTFIAFVNGQKKATIQGAD 94
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
+KVD + CE +SE +NSMPTF+ ++G ++++ GA+
Sbjct: 56 LKVDVEICEKTSSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
+KVD + CE +SE +NSMPTF+ ++G ++++ GA+
Sbjct: 56 LKVDVEICEKTSSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = -1
Query: 711 VKVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
+KVD + CE +SE +NSMPTF+ ++G ++++ GA+
Sbjct: 56 LKVDVEICEKTSSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein.
Length = 542
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -1
Query: 684 DIASEYNINSMPTFVFVKNGKKLDEFSGAN 595
DI YNI++MPTF+F+KN +++D GAN
Sbjct: 2 DIVQRYNISAMPTFIFLKNRQQVDMVRGAN 31
>Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical
protein B0024.9 protein.
Length = 119
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSG 601
K++ D ++A +Y I+++PT KNG+K+ FSG
Sbjct: 67 KINVDHAGELAMDYGISAVPTVFAFKNGEKISGFSG 102
>U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2a protein.
Length = 393
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 705 VDXDECEDIASEYNINSMPTFVFVKNGK 622
VD D+ DIA++Y++N PT +NG+
Sbjct: 76 VDADKNNDIATKYHVNKYPTLKLFRNGE 103
>U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2b protein.
Length = 393
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 705 VDXDECEDIASEYNINSMPTFVFVKNGK 622
VD D+ DIA++Y++N PT +NG+
Sbjct: 76 VDADKNNDIATKYHVNKYPTLKLFRNGE 103
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 705 VDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSG 601
+D + I+ + I + PT VF NGK++D G
Sbjct: 57 IDAEALPGISLNFKITAAPTLVFFSNGKEVDRIDG 91
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 705 VDXDECEDIASEYNINSMPTFVFVKNGKKLDEFSG 601
+D + I+ + I + PT VF NGK++D G
Sbjct: 57 IDAEALPGISLNFKITAAPTLVFFSNGKEVDRIDG 91
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGKKLD 613
KVD +D+ ++Y ++ PT ++NG++ D
Sbjct: 204 KVDATIEKDLGTKYGVSGYPTMKIIRNGRRFD 235
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGK 622
KVD E + +AS++ + PT ++ K+GK
Sbjct: 80 KVDATENQALASKFEVRGYPTILYFKSGK 108
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 708 KVDXDECEDIASEYNINSMPTFVFVKNGK 622
KVD E + +AS++ + PT ++ K+GK
Sbjct: 80 KVDATENQALASKFEVRGYPTILYFKSGK 108
>Z54218-1|CAA90954.1| 315|Caenorhabditis elegans Hypothetical
protein F37B12.1 protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Frame = +2
Query: 398 CIPEAANTKKLISSNSLQTLKTFFIYILKTYTCFFF--------KFHLSFHRRLRTTLVS 553
C KL + S ++K +Y L YTC FF LSF R ++
Sbjct: 207 CTSTVTTAPKLTKAKSCDSIKRTRLYFLVVYTCRFFSPTATSHSSHSLSFLGTCRVFWLN 266
Query: 554 IYLCLRIVVLSLS 592
+ L + +LSLS
Sbjct: 267 FTVFLSVSLLSLS 279
>Z81486-6|CAB03988.2| 309|Caenorhabditis elegans Hypothetical
protein C53A5.8 protein.
Length = 309
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 452 TLKTFFIYILKTYTCFFFKFHLSFHRRLRTTLVSIYLCLRIVVLSLSTLAPENSSSFLPF 631
T+ F+ IL F KF SF+R L+ L++ LC + SL ++ +N FLP
Sbjct: 29 TITVVFMLILLFLFQFSKKFSYSFYRILQLDLITNILC---NLNSLFSVRFQNHLMFLPV 85
Query: 632 L 634
L
Sbjct: 86 L 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,281,282
Number of Sequences: 27780
Number of extensions: 239222
Number of successful extensions: 517
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -