Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_I16
         (665 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0480 + 3616123-3617506,3618033-3618166,3618578-3618818,361...    28   7.7  

>07_01_0480 +
           3616123-3617506,3618033-3618166,3618578-3618818,
           3618912-3619120,3619234-3619265,3619363-3619474,
           3619609-3619890
          Length = 797

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/68 (20%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -3

Query: 345 FVIMNFLSNDNKFCFVKFYCQGI-MTYIKNFNNQLTIMKICLF*FLKLLVNIFYFNFKVT 169
           +++  ++ N N    +    +G  +T+++  +  + + K   F    ++  +F  N K+T
Sbjct: 570 YLVFEYVQNGNLRGRISQGTEGRKLTWVQRISTAIGVAKGIQFLHGGIIPGLFANNLKIT 629

Query: 168 NVLINNNL 145
           N+L++ NL
Sbjct: 630 NILLDQNL 637


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,091,179
Number of Sequences: 37544
Number of extensions: 188656
Number of successful extensions: 280
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)