Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_I16
         (665 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42844-4|ABM01868.1|  739|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AC026301-1|AAK68897.1|  280|Caenorhabditis elegans Hypothetical ...    29   3.0  
U29614-4|ABD94109.1|  244|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z73969-15|CAA98238.1|  546|Caenorhabditis elegans Hypothetical p...    27   9.1  
AF072380-1|AAC62467.1|  546|Caenorhabditis elegans Akt/PKB serin...    27   9.1  

>U42844-4|ABM01868.1|  739|Caenorhabditis elegans Hypothetical
           protein C08A9.3 protein.
          Length = 739

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -3

Query: 324 SNDNKFCFVKFYCQGIMTYIKNFNNQLTIMKICLF*FLKLLVNIF---YFNFKVTNVLIN 154
           SN+  FC++ F C       K+FN+  +   + +   L L++ +F    F+FK+  +   
Sbjct: 379 SNNLNFCYLNFLCSLEFLCFKSFNSMTSASSLAVIGVLNLII-VFREKIFSFKIPRLPTT 437

Query: 153 NNL 145
           + L
Sbjct: 438 HGL 440


>AC026301-1|AAK68897.1|  280|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.6 protein.
          Length = 280

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 234 KICLF*FLKLLVNIFYFNFKVTNVLINNNLSLLH 133
           K+C + F+K+ VN     F    +LI NNLS  +
Sbjct: 246 KVCSYEFMKIFVNFLSAIFSENVILILNNLSFTY 279


>U29614-4|ABD94109.1|  244|Caenorhabditis elegans Hypothetical
           protein F18E9.8 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = -3

Query: 291 YCQGIMTYIKNFNNQLTIMKICLF*FLKLLVNIFYFNFKVTNVLINNNLSLLHSREY 121
           Y  G   Y  N +  LT+  IC+       V IF++ ++  N+++ N+ + L +  Y
Sbjct: 15  YSVGFYRYFFNCHQMLTLSLICMTTSASTTVEIFFWRWQ--NIILPNSSAKLKTATY 69


>Z73969-15|CAA98238.1|  546|Caenorhabditis elegans Hypothetical
           protein C12D8.10b protein.
          Length = 546

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 464 LASMPIFADDYLIFRKKIKFSINK*RILLKKVRCYTPFLTQSLTIKMINKQLC 622
           L ++ I   D +I R+++  ++ + R+L    RC  PFLT+       N +LC
Sbjct: 218 LYAIKILKKDVIIAREEVAHTLTENRVLQ---RCKHPFLTELKYSFQTNDRLC 267


>AF072380-1|AAC62467.1|  546|Caenorhabditis elegans Akt/PKB
           serine/threonine kinase protein.
          Length = 546

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 464 LASMPIFADDYLIFRKKIKFSINK*RILLKKVRCYTPFLTQSLTIKMINKQLC 622
           L ++ I   D +I R+++  ++ + R+L    RC  PFLT+       N +LC
Sbjct: 218 LYAIKILKKDVIIAREEVAHTLTENRVLQ---RCKHPFLTELKYSFQTNDRLC 267


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,231,549
Number of Sequences: 27780
Number of extensions: 224820
Number of successful extensions: 342
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)