Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_I04
         (677 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22AJ0 Cluster: Putative uncharacterized protein; n=2; ...    34   2.8  
UniRef50_UPI000023CC9B Cluster: hypothetical protein FG07185.1; ...    33   4.8  
UniRef50_Q559G7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  
UniRef50_Q7S846 Cluster: Predicted protein; n=1; Neurospora cras...    33   8.4  

>UniRef50_Q22AJ0 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 400

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 150 FTNKQKDSSFILSRKKSNHFWALAQGTRIKKR 55
           F N  K+SSFIL  K  N FW + QG  ++ R
Sbjct: 40  FFNLTKESSFILYLKYQNQFWFIKQGGEVESR 71



 Score = 34.3 bits (75), Expect = 2.8
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 150 FTNKQKDSSFILSRKKSNHFWALAQGTRIKKR 55
           F N  K+SSFIL  K  N FW + QG  ++ R
Sbjct: 203 FFNLTKESSFILYLKYQNQFWFIKQGGEVESR 234


>UniRef50_UPI000023CC9B Cluster: hypothetical protein FG07185.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG07185.1 - Gibberella zeae PH-1
          Length = 1041

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 164 LRIQASPTSKKIQASFCQEKKAIISGHWH 78
           +++ A    K    S CQE K II+GHWH
Sbjct: 898 VKVLAQDIEKMAAVSECQEDKPIINGHWH 926


>UniRef50_Q559G7 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1379

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 23/84 (27%), Positives = 40/84 (47%)
 Frame = -3

Query: 366  NNSTEHDLREHYYTTFTLNRISDNLSDEQFYFSNLSLEIATGIC*LSSYIEVYC*KIGFI 187
            NN+  ++   +   T T+N + DNLS       N  +     IC  S +IE+ C ++   
Sbjct: 1263 NNNNNNNNNNNNNNTTTINSMKDNLSG-----GNDKISTTFNICFYSGFIEI-C-ELLLS 1315

Query: 186  FYDSIIYVKNSSFTNKQKDSSFIL 115
             Y SI+ +K+S+     K+   I+
Sbjct: 1316 SYSSILSIKSSNIIEAIKNDQIII 1339


>UniRef50_Q7S846 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 329

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = -3

Query: 231 LSSYIEVYC*KIGFIFYDSIIYVKNSSFTNKQKDSSFILS 112
           LSS  + +C K+G++ +D +  +K+SS   +  D +++LS
Sbjct: 212 LSSEKQYHCLKLGYLLHDKLCMIKSSSTKREIDDVTYVLS 251


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,189,951
Number of Sequences: 1657284
Number of extensions: 9766232
Number of successful extensions: 22061
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22056
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)