Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_I04
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54235-6|CAA90975.3|  199|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>Z54235-6|CAA90975.3|  199|Caenorhabditis elegans Hypothetical
           protein C09G9.5 protein.
          Length = 199

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -3

Query: 357 TEHDLR--EHYYTTFTLNRISDNLSDEQFYFSNLSLEIATGIC 235
           T+ DL+  E   T  T++ ISD LS +Q YFS  +    T +C
Sbjct: 3   TKRDLKKKEVSNTFITMSTISDKLSTDQNYFSMPTAPKPTKLC 45


>Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical
           protein C02C6.2b protein.
          Length = 554

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 357 LNCF*EKWFHFYNYFFRFI*QT*SFLS 437
           +NC    WFH +  FF +I  T +FLS
Sbjct: 440 MNCL-RTWFHHHKKFFYYIPSTTTFLS 465


>Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical
           protein C02C6.2a protein.
          Length = 561

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 357 LNCF*EKWFHFYNYFFRFI*QT*SFLS 437
           +NC    WFH +  FF +I  T +FLS
Sbjct: 447 MNCL-RTWFHHHKKFFYYIPSTTTFLS 472


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,487,723
Number of Sequences: 27780
Number of extensions: 257735
Number of successful extensions: 574
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)