BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_I03
(370 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ388479-1|ABD43194.1| 79|Anopheles gambiae adipokinetic hormo... 43 4e-06
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 24 1.6
EF519477-2|ABP73564.1| 177|Anopheles gambiae CTL4 protein. 24 2.1
U28809-1|AAC47326.1| 140|Anopheles gambiae lysozyme protein. 23 4.8
EF519475-2|ABP73560.1| 177|Anopheles gambiae CTL4 protein. 23 4.8
AY214334-1|AAP69612.1| 519|Anopheles gambiae nicotinate phospho... 23 4.8
>DQ388479-1|ABD43194.1| 79|Anopheles gambiae adipokinetic hormone
I preproprotein protein.
Length = 79
Score = 42.7 bits (96), Expect = 4e-06
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 10/72 (13%)
Frame = -1
Query: 292 FTILFLVLACFIMAEAQLTFTSSWGGKR---------AAIAGTVSCRND-EALAXIYKLI 143
FT+L + + ++ EAQLTFT +WG + + G +C+ ++L IY++I
Sbjct: 7 FTVLLICASLMLITEAQLTFTPAWGKRSQGAMGINPLGSTFGQDACKTPVDSLLVIYRMI 66
Query: 142 QNEAEKLLLCQK 107
Q EA+K++ C +
Sbjct: 67 QAEAQKIVDCSQ 78
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 104 LSRHHRNGNTDKMPXNHYIIFS*SLKCI 21
L+ HHRN +T +M +IF L CI
Sbjct: 331 LNYHHRNADTHEMSDWVRVIFLYWLPCI 358
>EF519477-2|ABP73564.1| 177|Anopheles gambiae CTL4 protein.
Length = 177
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 222 QLDVKVSWASAIMKQAKTRNRIVNSYIFG*VSSLSDFETATDHRPAEFI 368
Q+ WA + A NR+V ++ S++S T+ D P +FI
Sbjct: 129 QVKESAEWADGV---APANNRVVPFCVYIQGSTMSWVATSCDDEPRQFI 174
>U28809-1|AAC47326.1| 140|Anopheles gambiae lysozyme protein.
Length = 140
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 292 FTILFLVLACFIMAEAQ 242
FT+L ++AC +AEA+
Sbjct: 5 FTVLLAIVACCAVAEAK 21
>EF519475-2|ABP73560.1| 177|Anopheles gambiae CTL4 protein.
Length = 177
Score = 22.6 bits (46), Expect = 4.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 243 WASAIMKQAKTRNRIVNSYIFG*VSSLSDFETATDHRPAEFI 368
WA + A NR+ S ++ S++S T+ D P +FI
Sbjct: 136 WADGV---APANNRVEPSCVYIQGSTMSWVATSCDDEPRQFI 174
>AY214334-1|AAP69612.1| 519|Anopheles gambiae nicotinate
phosphoribosyltransferase-like protein protein.
Length = 519
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 190 VSCRNDEALAXIYKLIQ-NEAEKLLLCQ 110
V+C+ AL +YK+++ N ++ L Q
Sbjct: 358 VTCQRQPALGCVYKMVEINNQPRIKLSQ 385
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,463
Number of Sequences: 2352
Number of extensions: 7603
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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