Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_I01
         (742 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q237T9 Cluster: Cyclic nucleotide-binding domain contai...    35   2.4  
UniRef50_Q8IDZ6 Cluster: Putative uncharacterized protein PF13_0...    33   7.4  
UniRef50_Q22AG9 Cluster: Putative uncharacterized protein; n=2; ...    33   7.4  
UniRef50_A7T376 Cluster: Predicted protein; n=1; Nematostella ve...    33   9.7  

>UniRef50_Q237T9 Cluster: Cyclic nucleotide-binding domain containing
            protein; n=1; Tetrahymena thermophila SB210|Rep: Cyclic
            nucleotide-binding domain containing protein -
            Tetrahymena thermophila SB210
          Length = 2478

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 550  NFTKSKFHFYKGHNNFGNVINKRVLESDMINTQPTSQ 660
            N   SKF F +G  NF N +NK+++    +NTQP  +
Sbjct: 1424 NLQVSKFEFQEG--NFSNDVNKQIIIQGQVNTQPVQE 1458


>UniRef50_Q8IDZ6 Cluster: Putative uncharacterized protein
           PF13_0182; n=2; Plasmodium|Rep: Putative uncharacterized
           protein PF13_0182 - Plasmodium falciparum (isolate 3D7)
          Length = 1838

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +1

Query: 532 ISKTSLNFTK--SKFHFYKGHNNFGNVINKRVLESDMINTQPTSQNNI*IIKAIIDLQYM 705
           IS  S N  K  ++ H  K +N+F N+ NK  L+S   N   T+QN    + +  +++  
Sbjct: 721 ISGVSSNMDKISNQIHNNKQNNDFNNIKNKDKLDSTSSNLLHTNQNTNVYVPS--NMEKK 778

Query: 706 HQHDSFSNIENN 741
           + H    N ENN
Sbjct: 779 NNHVILQNKENN 790


>UniRef50_Q22AG9 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 583

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = +1

Query: 469 TMSNLIQQYYSTSVLLA*NEEISKTSLNFTKSKFHFYKGHNNFGNVINKRV-LESDMIN- 642
           T++N I+ + S  +L+  NE++SK  +NF K+ F    G N F + ++K   L    IN 
Sbjct: 4   TITNKIKDFQS--LLINVNEKVSKLEINFKKATFVQENGINQFMSNLSKFADLNHLTINL 61

Query: 643 -TQPTSQNNI*IIKAIIDLQYMHQHDSFS 726
             Q  ++N I  +  +I  Q +++ +SFS
Sbjct: 62  IQQSLNENTIQSLSQVI--QSLNKLESFS 88


>UniRef50_A7T376 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 129

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = -3

Query: 386 IYLSLNIYHKLTMGLAFCLIIFALVF**FYMCKHRCLFLRKIR*MYY*FLVFV--IYAFN 213
           IY S++IYH     +A   +  +L     Y+C   C+F+     +Y+ +L  +  I+ ++
Sbjct: 4   IYNSMHIYHACLCIIACIFVYHSLHIYHAYLCIIACIFMYHRMHIYHAYLCIIACIFMYH 63

Query: 212 AMCIWH 195
           +M I+H
Sbjct: 64  SMYIYH 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,037,174
Number of Sequences: 1657284
Number of extensions: 10943272
Number of successful extensions: 23268
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23252
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)