Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_H17
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 43 3e-05
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 37 0.003
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 34 0.020
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 32 0.062
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 32 0.083
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 31 0.11
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 31 0.14
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.14
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.44
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 0.58
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 29 0.77
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 29 0.77
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 29 0.77
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 28 1.0
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 28 1.3
SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 1.8
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 27 1.8
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 27 1.8
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 26 4.1
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 4.1
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 26 4.1
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 26 5.4
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 25 7.2
SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit... 25 7.2
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 25 9.5
SPBC215.08c |arg4||carbamoyl-phosphate synthase Arg4|Schizosacch... 25 9.5
SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 25 9.5
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 43.2 bits (97), Expect = 3e-05
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Frame = -3
Query: 592 ERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEE-- 419
E+++A + EA AE A+ K EV +L++ E + S++ ELEEE
Sbjct: 6 EKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETK 65
Query: 418 -LRVVGNNLKSLEVSEEKANQR----EEEYKNQIKTL---TTRLKXXXXXXXXXXRSVQK 263
LR+ +N + E+ +++ EEE + K L T +++ R VQ
Sbjct: 66 QLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQS 125
Query: 262 LQKEVDRLEDELVAEKEKYKDIGDDLD 182
L++E D +E +L +KY + +LD
Sbjct: 126 LERERDDMEQKLEEMTDKYTKVKAELD 152
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = -3
Query: 430 LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKE 251
LE+E + + LKSLE ++ + EE ++ LT +LK + + Q+E
Sbjct: 897 LEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKSSDLGKKLTARQEE 956
Query: 250 VDRLEDELVAEKEKYKDIGDDLD 182
+ L++E +++ + + LD
Sbjct: 957 ISNLKEENMSQSQAITSVKSKLD 979
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 33.9 bits (74), Expect = 0.020
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = -1
Query: 360 NAKRSTKIRSKPSPPV*RRLKHVPSS-PSVPCRNCKRRSIGLKTNLSPKRRNTRTSETIW 184
NAK + R SP L +PSS PS +N + I + S + N R++E ++
Sbjct: 186 NAKNYEENREPMSPSPQEALPLMPSSPPSQDYQNDQNHLILYTNSESIPKLNLRSNELVY 245
Query: 183 IPPXXXXXSRNKLPLYKD---SKSECPGNT-ISPRF 88
PP + L L KD KS+C NT + P F
Sbjct: 246 -PPPSKDLLQKLLALEKDGQVEKSDCSKNTQLKPSF 280
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 32.3 bits (70), Expect = 0.062
Identities = 19/82 (23%), Positives = 38/82 (46%)
Frame = -3
Query: 424 EELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVD 245
+ELR + NL+ + +++ + E + +L RLK ++ Q+ +
Sbjct: 713 KELRSINQNLQDIISRQDQRASKFAEELLHVNSLAERLKGELNASKGEKDLRKRTQERLI 772
Query: 244 RLEDELVAEKEKYKDIGDDLDT 179
D+L+AE+E+ + DL T
Sbjct: 773 SENDKLLAERERLMSLVSDLQT 794
Score = 28.7 bits (61), Expect = 0.77
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = -3
Query: 433 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 254
+L+E + N+L SL+ S EK+ EY ++IKTL + + Q ++
Sbjct: 823 KLKESNEKMSNDLHSLQKSLEKSGI---EYSSRIKTLMLEKQSLSEDNRKLLDNQQMMEI 879
Query: 253 EVDRLEDELVAEKEKYKDI 197
++ L + EK+++ +
Sbjct: 880 KLQELNGVIELEKQRFSTL 898
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 31.9 bits (69), Expect = 0.083
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Frame = -3
Query: 595 EERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXS-------KI 437
E+ + +++L E + E+++ Y+ V + +E +L S +I
Sbjct: 796 EKEFNQYKHKLDEFTPILEKSENDYNGVKLECEQLEGELQNHQQSLVQGESTTSLIKTEI 855
Query: 436 VELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQ 257
ELE L +N K L E + + +I +L+T +K ++QKL
Sbjct: 856 AELELSLVNEEHNRKKLTELIEIESAKFSGLNKEIDSLSTSMKTFESEINNGELTIQKLN 915
Query: 256 KEVDRLEDE 230
E DRLE E
Sbjct: 916 HEFDRLERE 924
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 31.5 bits (68), Expect = 0.11
Identities = 24/127 (18%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = -3
Query: 604 LADEERMDALENQLKEARFLAEEADKKYDE-VARKLAMVEADLXXXXXXXXXXXSKIVEL 428
L ++ L+ Q + ++F + K+ DE + +L + ++ ++ E+
Sbjct: 367 LLKNQKQSLLDKQSRTSQFTTK---KERDEWIRNQLLQINRNINSTKENSDYLKTEYDEM 423
Query: 427 EEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEV 248
E EL+ + K +E+S E R + I ++ R + R KL+ +
Sbjct: 424 ENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKRKSLWREEAKLKSSI 483
Query: 247 DRLEDEL 227
+ ++D+L
Sbjct: 484 ENVKDDL 490
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 31.1 bits (67), Expect = 0.14
Identities = 26/149 (17%), Positives = 61/149 (40%), Gaps = 5/149 (3%)
Frame = -3
Query: 613 NXSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIV 434
N + E + L + + +R +E + + ++L +E D + V
Sbjct: 475 NAIVEAESSKNELWDSMMVSRMKTQEQSIELTRLYKQLQDIEEDYENKLMRMEQQWREDV 534
Query: 433 E-LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTR----LKXXXXXXXXXXRSV 269
+ L+E + + L+ + K+++ ++Y+ + L T ++ S+
Sbjct: 535 DQLQEYVEEITQELQDTKEVLSKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENEESI 594
Query: 268 QKLQKEVDRLEDELVAEKEKYKDIGDDLD 182
++EV++L DE+ E+Y D + D
Sbjct: 595 SLFKEEVEKLTDEITQLSERYNDKCHEFD 623
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.1 bits (67), Expect = 0.14
Identities = 20/92 (21%), Positives = 45/92 (48%)
Frame = -3
Query: 589 RMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEELRV 410
R++ L N+L+ + ++ +KK++E L + ++++ S +E +L
Sbjct: 671 RLEQLTNELESLKSISRNKEKKFEEAISSLQLEKSNIQLQLTSLTSERSLALEKLNDLE- 729
Query: 409 VGNNLKSLEVSEEKANQREEEYKNQIKTLTTR 314
KSL +SE ++ +E YK+ + L ++
Sbjct: 730 -----KSLVLSERSKDELDESYKSLQEQLASK 756
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.5 bits (63), Expect = 0.44
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Frame = -3
Query: 592 ERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEELR 413
ER+ +LENQ+ AD+KY+ + + +E DL LE++L
Sbjct: 902 ERLSSLENQV-------TIADEKYEFLYAEKQSIEEDLANKQTEISYLSDLSSTLEKKLS 954
Query: 412 VVGNNLKSLEVSEEKANQREEEYKN---QIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDR 242
+ K + K + E++Y N + + L ++++L +++ R
Sbjct: 955 SI---KKDEQTISSKYKELEKDYLNIMADYQHSSQHLSNLEKAINEKNLNIRELNEKLMR 1011
Query: 241 LEDELVAEKEKY 206
L+DEL+ ++ Y
Sbjct: 1012 LDDELLLKQRSY 1023
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.1 bits (62), Expect = 0.58
Identities = 28/139 (20%), Positives = 60/139 (43%)
Frame = -3
Query: 547 LAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEK 368
+ +E D+ +E+ +++ E ++ +K+ + EE V N + + +
Sbjct: 539 ITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAFQYKDNDLRR 598
Query: 367 ANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEKEKYKDIGDD 188
++ + +++ K LT+ L+ + L++ V LE E + K+ D
Sbjct: 599 FHESINKLQDREKELTSNLEKKNLV-------ISSLRETVAMLEKERESIKKYLSGNAKD 651
Query: 187 LDTAFVELILKE*ASVIQR 131
LD + IL + SV+QR
Sbjct: 652 LDNTNLMEILNDKISVLQR 670
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 28.7 bits (61), Expect = 0.77
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Frame = -3
Query: 577 LENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEELRVVG-- 404
LEN ++ R L+E +K+ DE+ L +E L +I + +++ +
Sbjct: 124 LENLDEQTRKLSERTEKQQDELDIALDDLEETLNTLKRTSENRDREIARISQDVYTMSTI 183
Query: 403 ---NNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLE 236
+L+ ++ S+E+A Q + ++ L T K S+ L+ +D E
Sbjct: 184 TLPQSLEQIKKSQEEALQNLSREISSLRCLQTDSKKDDTFATTSNSSIPVLENPLDTSE 242
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.7 bits (61), Expect = 0.77
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = -3
Query: 433 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 254
E +L V+ N+KS + ++ +E+K +++ L +L ++ ++
Sbjct: 483 EQARKLEVLDLNVKSSREQLQYVSKSNQEHKKEVEALQLQL-------VNSSTELESVKS 535
Query: 253 EVDRLEDELVAEKEKYK 203
E ++L++ELV E EK K
Sbjct: 536 ENEKLKNELVLEIEKRK 552
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 28.7 bits (61), Expect = 0.77
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 291 PSSPSVPCRNCKRRSIGLKTNLSPKR 214
P+SP+VP + S+ TN+SP+R
Sbjct: 138 PNSPTVPSKFSLNPSVATSTNISPRR 163
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +1
Query: 259 AVSAR--NARRTRHVLQPPSDGW 321
+V+AR N RR RHVL P +GW
Sbjct: 211 SVNARHDNLRRKRHVLVQPQEGW 233
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -3
Query: 442 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTL 323
+I +L EE + + ++ LE E+AN E+Y+ Q + L
Sbjct: 147 QITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEAL 186
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +1
Query: 367 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPHRISCRPP 540
PSP+ LP S Y + PP + P+ A P+ Q +IS PP
Sbjct: 402 PSPMELPSPSTVYHQVFYPPTSTSVSSYGLGKTPQPAYGSSSPYVNGHQTQQISSLPP 459
>SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 268
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -3
Query: 631 ARKVLENXSLADEERMDALENQLKEARFLAEEADKKYD 518
+R++L S + E D L + L+ RF+ ++A K Y+
Sbjct: 93 SRQLLRQPSFSSSENTDRLADLLRVRRFIYQKAWKSYE 130
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 6/39 (15%)
Frame = -3
Query: 586 MDALENQLKEARFLAEE----ADK--KYDEVARKLAMVE 488
+ LEN++KEAR + EE A+K YDE+ R+L++++
Sbjct: 316 IQTLENEVKEARKVKEESLTLANKFSDYDEIKRELSVLK 354
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = -3
Query: 271 VQKLQKEVDRLEDELVAEKEKYKDIGDDLDTAFVEL 164
+QK +KE +LE++L + KY++ ++ + V+L
Sbjct: 157 IQKAKKEESKLEEDLRNARAKYEESLEEFEDRMVQL 192
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -3
Query: 274 SVQKLQKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE 152
+++ KEV ++ + +K+K D DD++ + E +L E
Sbjct: 69 TIESDTKEVQNIKPKSKKKKKKLNDSSDDIEGKYFEELLAE 109
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 26.2 bits (55), Expect = 4.1
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Frame = -1
Query: 390 LWKSQRRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSV---PCRNCKRRSIGLKTNLSP 220
L+KS+ + K+ + S SP L H + + P +N +RR+ L+T L P
Sbjct: 322 LFKSEEEKDPVGKQKLPLESSLSP-----LDHSSAEKEMQKAPAKNKRRRTGSLETGLYP 376
Query: 219 KRRNT----RTSETIW 184
K T R+ +W
Sbjct: 377 KESPTPSKKRSKRVLW 392
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 26.2 bits (55), Expect = 4.1
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 134 LYNGSLFLEDELYEGGIQIVSDVLVFLLFGDKFVFKP--IDLLLQFLHGTLGELGTCFSL 307
LYN S ++ ++ S + V + +G +FVF+ ID L + LH L +G C L
Sbjct: 499 LYNISRGIDTDIINNETPRRS-ISVDVNWGVRFVFQEDGIDFLKRLLHELLSRMGKCQVL 557
Query: 308 L 310
L
Sbjct: 558 L 558
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 481 SQPQPWPAYEQPHRISCRPPQRGTWLPSADS 573
S P P P QP ++S P LPSA S
Sbjct: 381 STPLPEPTPGQPRKVSGHNPPSARRLPSASS 411
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -1
Query: 384 KSQRRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRSIGLKTNLSPKRRNT 205
KS K+S ++ KP V ++ P PS+ K S+ K+ PKR T
Sbjct: 106 KSNGNARKETKQSERVNYKPGMRVLTKMSGFPWWPSMVVTESKMTSVARKS--KPKRAGT 163
>SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit
Rrn7 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 15 HVCMDFHNLKVRNTKYKLESMF 80
+VC F + + RN+KYK +SMF
Sbjct: 344 NVCYGFDDAQTRNSKYK-DSMF 364
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 9.5
Identities = 21/95 (22%), Positives = 40/95 (42%)
Frame = -3
Query: 595 EERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEEL 416
EER+ +E L EE+ + + +KL + + I +LE+ +
Sbjct: 464 EERVSEVERTFLTK--LLEESAQGIEYTDQKLEKMGGWMKKLQDENSEKTETIAQLEQII 521
Query: 415 RVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRL 311
+ L+SLE K + ++ +NQ K + +L
Sbjct: 522 EELHEELRSLEEESIKESSATQQNENQHKRSSRKL 556
>SPBC215.08c |arg4||carbamoyl-phosphate synthase
Arg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1160
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 155 GISFRYTKTRSLSALATPSARDSIFKHRF*FIFCIPDF 42
G++F TRS+ P+ARD + HR +P F
Sbjct: 934 GVNFIDVATRSIIDQEVPAARDLMAVHRDYVCVKVPQF 971
>SPBC887.10 |mcs4||two-component response regulator
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 187 DRLRCPCISPFRRQVRLQAYRPPFAVSARNARRTR-HVLQPPSD 315
D L P +P R Q P + RNA RTR H P S+
Sbjct: 148 DSLESPVSAPSRHQSTYSYKGGPLNYNLRNASRTRSHQTLPSSN 191
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,335,679
Number of Sequences: 5004
Number of extensions: 47016
Number of successful extensions: 224
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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