Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_H16
         (544 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical...    35   0.044
Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical p...    29   1.6  
Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical pr...    29   1.6  
AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical ...    29   2.2  
U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC006696-4|AAF39985.1|  215|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    28   3.8  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    28   3.8  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      28   3.8  
U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z68748-6|CAD27621.1|   88|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z68219-2|CAA92476.1|  300|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z77657-9|CAB01149.2|  381|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical
           protein F35F10.12 protein.
          Length = 471

 Score = 34.7 bits (76), Expect = 0.044
 Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = -3

Query: 293 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDRPQGRPYF 123
           DP+   +QPT +G G  P    P  V PP  Y   P  +G    DNGA     P G PY 
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401

Query: 122 KPTPXPWCSRWEVKN 78
              P P+ S  E K+
Sbjct: 402 SDVPAPYPSGDEPKD 416


>Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -3

Query: 272 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 174
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical
           protein M04G12.4b protein.
          Length = 550

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -3

Query: 272 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 174
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 62  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 90


>Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -3

Query: 272 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 174
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical
           protein T12G3.1 protein.
          Length = 693

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 347 PAYVNRPYNRPQRPIVINDPDPFFAQPTVGNGYEP 243
           P++   P   PQ P V + P PF   PT+GNG  P
Sbjct: 272 PSHQVNPAPMPQAPPV-STPVPFPPSPTIGNGAVP 305


>AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical
            protein H04J21.1 protein.
          Length = 1032

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -3

Query: 128  YFKPTPXPWCSRW 90
            +FKP+P P+CS+W
Sbjct: 992  FFKPSPGPYCSQW 1004


>U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical
           protein C50F7.5 protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = -3

Query: 425 VLISNPDPGFSRPVIGQPGYVPISTGPAYVNRPY-NRPQRPIVIN-DPDPFFAQPTVGNG 252
           V+ S+ DP     V+ QP   P     A  + P  + P  P  +N   DP  + P     
Sbjct: 67  VIASSADPILPTSVVPQPSNEPSPGTVAPSDEPSPSGPPSPGPVNPSEDPQPSGPPSPGP 126

Query: 251 YEPIDNRPYIVNPPKDYNPNG 189
            +P ++    V P +D+ P+G
Sbjct: 127 VDPSEDPQPSVEPSEDHQPSG 147


>AC006696-4|AAF39985.1|  215|Caenorhabditis elegans Hypothetical
           protein W08E12.6 protein.
          Length = 215

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
 Frame = -3

Query: 434 PGHVLISNPDPGFSRPVIGQPGYVPISTGPAYVNRPYNRPQRPIVINDPDPFF--AQPTV 261
           P  + ++ P P    P  G P   P   GPA V      P  PI++N P P F  A P  
Sbjct: 50  PAPIFVAPPPP----PCFG-PACPPPCFGPACV------PLAPIIVNGPPPCFGPACPPP 98

Query: 260 GNGYEPIDNRPYIVN-PPKDYNP 195
             G       P IVN PP  + P
Sbjct: 99  CFGPACAPPAPIIVNGPPPCFGP 121



 Score = 27.5 bits (58), Expect = 6.6
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = -3

Query: 374 PGYVPISTGPAYVNRPYNRPQRPIVINDPDPFF--AQPTVGNGYEPIDNRPYIVN-PPKD 204
           P + P    P +   P   P  PI++N P P F  A P    G     + P IVN PP  
Sbjct: 89  PCFGPACPPPCF--GPACAPPAPIIVNGPPPCFGPACPPPCFGPACAPSAPIIVNGPPPC 146

Query: 203 YNP 195
           + P
Sbjct: 147 FGP 149


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 99   APGXRGRLEVRSALGTVHVICTVVDRFVAVSIRVVVF 209
            APG  G +E   +LGT++   +  D+F A+  R  VF
Sbjct: 2831 APGLAGDIETLESLGTLYNEISEFDQFAAIWERRAVF 2867


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 99   APGXRGRLEVRSALGTVHVICTVVDRFVAVSIRVVVF 209
            APG  G +E   +LGT++   +  D+F A+  R  VF
Sbjct: 2842 APGLAGDIETLESLGTLYNEISEFDQFAAIWERRAVF 2878


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 99   APGXRGRLEVRSALGTVHVICTVVDRFVAVSIRVVVF 209
            APG  G +E   +LGT++   +  D+F A+  R  VF
Sbjct: 2842 APGLAGDIETLESLGTLYNEISEFDQFAAIWERRAVF 2878


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 99   APGXRGRLEVRSALGTVHVICTVVDRFVAVSIRVVVF 209
            APG  G +E   +LGT++   +  D+F A+  R  VF
Sbjct: 2842 APGLAGDIETLESLGTLYNEISEFDQFAAIWERRAVF 2878


>U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical
           protein F10G7.6 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -3

Query: 248 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 162
           EP D  P + V PP  + PN NG  P  NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268


>Z68748-6|CAD27621.1|   88|Caenorhabditis elegans Hypothetical
           protein F13H10.6 protein.
          Length = 88

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = -3

Query: 251 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTP 111
           Y+P +  P     P    P   GY P   G YY    QG PY+   P
Sbjct: 3   YQPYNQPPPYTQQPGYPPPGSAGYVPQ-QGGYYPQGQQG-PYYPQQP 47


>Z68219-2|CAA92476.1|  300|Caenorhabditis elegans Hypothetical
           protein T05A1.2 protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 25/95 (26%), Positives = 32/95 (33%), Gaps = 3/95 (3%)
 Frame = -3

Query: 380 GQPGYVPISTGPAYVNRPYNRPQRPIVINDPDPFFAQPTVGNGYEPIDNRPYI---VNPP 210
           G+PG       P     P   PQ P     P P  A P    G      +P       PP
Sbjct: 113 GRPGTPGRPGAPGAPGHPGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPP 172

Query: 209 KDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 105
               PNG   +P   G +  +   G+P  +  P P
Sbjct: 173 GHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGP 207


>Z77657-9|CAB01149.2|  381|Caenorhabditis elegans Hypothetical
           protein F08H9.5 protein.
          Length = 381

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -3

Query: 308 PIVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPN 192
           PI  +  +  F  P   N Y+P   + Y VN P  +  N
Sbjct: 272 PISQSGQNGSFTSPNYPNNYDPYTEQIYYVNAPTGFQVN 310


>U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical
           protein C30G12.1 protein.
          Length = 469

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 205 TTTLMETATNLSTTVHITWTVPKADLTSSLPLXPGAR 95
           TTT M T T  ST +  T T P+     ++P     R
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFSTTTR 330


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,037,699
Number of Sequences: 27780
Number of extensions: 296446
Number of successful extensions: 785
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)