SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_H12
         (828 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008873-1|AAH08873.1|  221|Homo sapiens TM2 domain containing 3...   173   7e-43
AK026257-1|BAB15415.1|  221|Homo sapiens protein ( Homo sapiens ...   173   7e-43
AF353992-1|AAK35066.1|  221|Homo sapiens BBP-like protein 2 prot...   173   7e-43
BC006150-1|AAH06150.1|  247|Homo sapiens TM2 domain containing 3...   173   9e-43
AL512689-1|CAC21647.1|   80|Homo sapiens hypothetical protein pr...   101   4e-21
BC109050-1|AAI09051.1|  214|Homo sapiens TM2 domain containing 2...    56   2e-07
BC109049-1|AAI09050.1|  214|Homo sapiens TM2 domain containing 2...    56   2e-07
BC004878-1|AAH04878.2|  171|Homo sapiens TM2 domain containing 2...    56   2e-07
AK075155-1|BAC11437.1|  171|Homo sapiens protein ( Homo sapiens ...    56   2e-07
AK075027-1|BAC11359.1|  171|Homo sapiens protein ( Homo sapiens ...    56   2e-07
AF353991-1|AAK35065.1|  214|Homo sapiens BBP-like protein 1 prot...    56   2e-07
BC029486-1|AAH29486.1|  207|Homo sapiens TM2 domain containing 1...    44   5e-04
AF353990-1|AAK35064.1|  207|Homo sapiens beta-amyloid binding pr...    44   5e-04
X82494-1|CAA57876.1| 1184|Homo sapiens fibulin-2 protein.              31   3.9  
BC051690-1|AAH51690.1| 1184|Homo sapiens fibulin 2 protein.            31   3.9  
AY130459-1|AAN05436.1| 1231|Homo sapiens fibulin 2 protein.            31   3.9  
AY130458-1|AAN05435.1| 1231|Homo sapiens fibulin 2 protein.            31   5.1  

>BC008873-1|AAH08873.1|  221|Homo sapiens TM2 domain containing 3
           protein.
          Length = 221

 Score =  173 bits (421), Expect = 7e-43
 Identities = 82/195 (42%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
 Frame = -3

Query: 625 GVSFSENEEYIKSCPSVDQENMTECSSLLYPCITCNRSIDCRYGGFYNYTCTVKPKVVC- 449
           G   +E   Y+  CPS        CS L   CI C  +  C YG    + C VKP V C 
Sbjct: 29  GGESTEIPPYVMKCPSNGL-----CSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCV 83

Query: 448 ----QGLKTFNKSSMCRFCYQTDKWEHRCEQKANCNSLASPLKYYLTNCTVSDDVICLGK 281
               +  K F  +  CRFC+Q  + ++ C    +C +++ P + Y  NCTV D V CLG 
Sbjct: 84  DQDFKSQKNFIINMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGN 143

Query: 280 RRFLKKVRCSWTSGTRWXXXXXXXXXXXXXXADRFYLGHWQEGIGKLFSFGGLGVWTLVD 101
           R F K + C+WT G +W              ADRFYLG W+EG+GKLFSFGGLG+WTL+D
Sbjct: 144 RTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLID 203

Query: 100 ALLIGRHHLGPADGA 56
            LLIG  ++GPADG+
Sbjct: 204 VLLIGVGYVGPADGS 218


>AK026257-1|BAB15415.1|  221|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22604 fis, clone HSI04630. ).
          Length = 221

 Score =  173 bits (421), Expect = 7e-43
 Identities = 82/195 (42%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
 Frame = -3

Query: 625 GVSFSENEEYIKSCPSVDQENMTECSSLLYPCITCNRSIDCRYGGFYNYTCTVKPKVVC- 449
           G   +E   Y+  CPS        CS L   CI C  +  C YG    + C VKP V C 
Sbjct: 29  GGESTEIPPYVMKCPSNGL-----CSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCV 83

Query: 448 ----QGLKTFNKSSMCRFCYQTDKWEHRCEQKANCNSLASPLKYYLTNCTVSDDVICLGK 281
               +  K F  +  CRFC+Q  + ++ C    +C +++ P + Y  NCTV D V CLG 
Sbjct: 84  DQDFKSQKNFIINMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGN 143

Query: 280 RRFLKKVRCSWTSGTRWXXXXXXXXXXXXXXADRFYLGHWQEGIGKLFSFGGLGVWTLVD 101
           R F K + C+WT G +W              ADRFYLG W+EG+GKLFSFGGLG+WTL+D
Sbjct: 144 RTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLID 203

Query: 100 ALLIGRHHLGPADGA 56
            LLIG  ++GPADG+
Sbjct: 204 VLLIGVGYVGPADGS 218


>AF353992-1|AAK35066.1|  221|Homo sapiens BBP-like protein 2
           protein.
          Length = 221

 Score =  173 bits (421), Expect = 7e-43
 Identities = 82/195 (42%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
 Frame = -3

Query: 625 GVSFSENEEYIKSCPSVDQENMTECSSLLYPCITCNRSIDCRYGGFYNYTCTVKPKVVC- 449
           G   +E   Y+  CPS        CS L   CI C  +  C YG    + C VKP V C 
Sbjct: 29  GGESTEIPPYVMKCPSNGL-----CSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCV 83

Query: 448 ----QGLKTFNKSSMCRFCYQTDKWEHRCEQKANCNSLASPLKYYLTNCTVSDDVICLGK 281
               +  K F  +  CRFC+Q  + ++ C    +C +++ P + Y  NCTV D V CLG 
Sbjct: 84  DQDFKSQKNFIINMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGN 143

Query: 280 RRFLKKVRCSWTSGTRWXXXXXXXXXXXXXXADRFYLGHWQEGIGKLFSFGGLGVWTLVD 101
           R F K + C+WT G +W              ADRFYLG W+EG+GKLFSFGGLG+WTL+D
Sbjct: 144 RTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLID 203

Query: 100 ALLIGRHHLGPADGA 56
            LLIG  ++GPADG+
Sbjct: 204 VLLIGVGYVGPADGS 218


>BC006150-1|AAH06150.1|  247|Homo sapiens TM2 domain containing 3
           protein.
          Length = 247

 Score =  173 bits (420), Expect = 9e-43
 Identities = 81/191 (42%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
 Frame = -3

Query: 613 SENEEYIKSCPSVDQENMTECSSLLYPCITCNRSIDCRYGGFYNYTCTVKPKVVC----- 449
           +E   Y+  CPS        CS L   CI C  +  C YG    + C VKP V C     
Sbjct: 59  TEIPPYVMKCPSNGL-----CSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQDF 113

Query: 448 QGLKTFNKSSMCRFCYQTDKWEHRCEQKANCNSLASPLKYYLTNCTVSDDVICLGKRRFL 269
           +  K F  +  CRFC+Q  + ++ C    +C +++ P + Y  NCTV D V CLG R F 
Sbjct: 114 KSQKNFIINMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRTFP 173

Query: 268 KKVRCSWTSGTRWXXXXXXXXXXXXXXADRFYLGHWQEGIGKLFSFGGLGVWTLVDALLI 89
           K + C+WT G +W              ADRFYLG W+EG+GKLFSFGGLG+WTL+D LLI
Sbjct: 174 KMLYCNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLI 233

Query: 88  GRHHLGPADGA 56
           G  ++GPADG+
Sbjct: 234 GVGYVGPADGS 244


>AL512689-1|CAC21647.1|   80|Homo sapiens hypothetical protein
           protein.
          Length = 80

 Score =  101 bits (241), Expect = 4e-21
 Identities = 42/77 (54%), Positives = 52/77 (67%)
 Frame = -3

Query: 286 GKRRFLKKVRCSWTSGTRWXXXXXXXXXXXXXXADRFYLGHWQEGIGKLFSFGGLGVWTL 107
           G R F K + C+WT G +W              ADRFYLG W+EG+GKLFSFGGLG+WTL
Sbjct: 1   GNRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTL 60

Query: 106 VDALLIGRHHLGPADGA 56
           +D LLIG  ++GPADG+
Sbjct: 61  IDVLLIGVGYVGPADGS 77


>BC109050-1|AAI09051.1|  214|Homo sapiens TM2 domain containing 2
           protein.
          Length = 214

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = -3

Query: 343 SPLKYYLTNCTVSDDVICLGKRRFLKKVR-CSWTSGTRWXXXXXXXXXXXXXXADRFYLG 167
           S +++    C   D + C   R FL++ + C   +G  +               DRF LG
Sbjct: 112 SDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLG 171

Query: 166 HWQEGIGKLFSFGGLGVWTLVDALLIGRHHLGPADGA 56
           H    +GKL + GGLG+W  VD +L+    L P+DG+
Sbjct: 172 HTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGS 208


>BC109049-1|AAI09050.1|  214|Homo sapiens TM2 domain containing 2
           protein.
          Length = 214

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = -3

Query: 343 SPLKYYLTNCTVSDDVICLGKRRFLKKVR-CSWTSGTRWXXXXXXXXXXXXXXADRFYLG 167
           S +++    C   D + C   R FL++ + C   +G  +               DRF LG
Sbjct: 112 SDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLG 171

Query: 166 HWQEGIGKLFSFGGLGVWTLVDALLIGRHHLGPADGA 56
           H    +GKL + GGLG+W  VD +L+    L P+DG+
Sbjct: 172 HTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGS 208


>BC004878-1|AAH04878.2|  171|Homo sapiens TM2 domain containing 2
           protein.
          Length = 171

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = -3

Query: 343 SPLKYYLTNCTVSDDVICLGKRRFLKKVR-CSWTSGTRWXXXXXXXXXXXXXXADRFYLG 167
           S +++    C   D + C   R FL++ + C   +G  +               DRF LG
Sbjct: 69  SDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLG 128

Query: 166 HWQEGIGKLFSFGGLGVWTLVDALLIGRHHLGPADGA 56
           H    +GKL + GGLG+W  VD +L+    L P+DG+
Sbjct: 129 HTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGS 165


>AK075155-1|BAC11437.1|  171|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90674 fis, clone PLACE1005660, highly similar to
           BBP-like protein 1 isoform a. ).
          Length = 171

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = -3

Query: 343 SPLKYYLTNCTVSDDVICLGKRRFLKKVR-CSWTSGTRWXXXXXXXXXXXXXXADRFYLG 167
           S +++    C   D + C   R FL++ + C   +G  +               DRF LG
Sbjct: 69  SDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLG 128

Query: 166 HWQEGIGKLFSFGGLGVWTLVDALLIGRHHLGPADGA 56
           H    +GKL + GGLG+W  VD +L+    L P+DG+
Sbjct: 129 HTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGS 165


>AK075027-1|BAC11359.1|  171|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90546 fis, clone OVARC1000439, highly similar to
           BBP-like protein 1 isoform a. ).
          Length = 171

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = -3

Query: 343 SPLKYYLTNCTVSDDVICLGKRRFLKKVR-CSWTSGTRWXXXXXXXXXXXXXXADRFYLG 167
           S +++    C   D + C   R FL++ + C   +G  +               DRF LG
Sbjct: 69  SDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLG 128

Query: 166 HWQEGIGKLFSFGGLGVWTLVDALLIGRHHLGPADGA 56
           H    +GKL + GGLG+W  VD +L+    L P+DG+
Sbjct: 129 HTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGS 165


>AF353991-1|AAK35065.1|  214|Homo sapiens BBP-like protein 1
           protein.
          Length = 214

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = -3

Query: 343 SPLKYYLTNCTVSDDVICLGKRRFLKKVR-CSWTSGTRWXXXXXXXXXXXXXXADRFYLG 167
           S +++    C   D + C   R FL++ + C   +G  +               DRF LG
Sbjct: 112 SDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLG 171

Query: 166 HWQEGIGKLFSFGGLGVWTLVDALLIGRHHLGPADGA 56
           H    +GKL + GGLG+W  VD +L+    L P+DG+
Sbjct: 172 HTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGS 208


>BC029486-1|AAH29486.1|  207|Homo sapiens TM2 domain containing 1
           protein.
          Length = 207

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 23/73 (31%), Positives = 36/73 (49%)
 Frame = -3

Query: 274 FLKKVRCSWTSGTRWXXXXXXXXXXXXXXADRFYLGHWQEGIGKLFSFGGLGVWTLVDAL 95
           F K + C   +G  +              ADRFYLG+   G+ K  + G  G+ +L+D +
Sbjct: 107 FFKPISCRNVNGYSYKVAVALSLFLGWLGADRFYLGYPALGLLKFCTVGFCGIGSLIDFI 166

Query: 94  LIGRHHLGPADGA 56
           LI    +GP+DG+
Sbjct: 167 LISMQIVGPSDGS 179


>AF353990-1|AAK35064.1|  207|Homo sapiens beta-amyloid binding
           protein precursor protein.
          Length = 207

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 23/73 (31%), Positives = 36/73 (49%)
 Frame = -3

Query: 274 FLKKVRCSWTSGTRWXXXXXXXXXXXXXXADRFYLGHWQEGIGKLFSFGGLGVWTLVDAL 95
           F K + C   +G  +              ADRFYLG+   G+ K  + G  G+ +L+D +
Sbjct: 107 FFKPISCRNVNGYSYKVAVALSLFLGWLGADRFYLGYPALGLLKFCTVGFCGIGSLIDFI 166

Query: 94  LIGRHHLGPADGA 56
           LI    +GP+DG+
Sbjct: 167 LISMQIVGPSDGS 179


>X82494-1|CAA57876.1| 1184|Homo sapiens fibulin-2 protein.
          Length = 1184

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 18/73 (24%), Positives = 31/73 (42%)
 Frame = -3

Query: 565  NMTECSSLLYPCITCNRSIDCRYGGFYNYTCTVKPKVVCQGLKTFNKSSMCRFCYQTDKW 386
            ++ EC+SL  PC        C      +YTC   P +  +G    +  + C    + +  
Sbjct: 810  DINECTSLSEPC---RPGFSC-INTVGSYTCQRNPLICARGYHASDDGAKCVDVNECETG 865

Query: 385  EHRCEQKANCNSL 347
             HRC +   C++L
Sbjct: 866  VHRCGEGQVCHNL 878


>BC051690-1|AAH51690.1| 1184|Homo sapiens fibulin 2 protein.
          Length = 1184

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 18/73 (24%), Positives = 31/73 (42%)
 Frame = -3

Query: 565  NMTECSSLLYPCITCNRSIDCRYGGFYNYTCTVKPKVVCQGLKTFNKSSMCRFCYQTDKW 386
            ++ EC+SL  PC        C      +YTC   P +  +G    +  + C    + +  
Sbjct: 810  DINECTSLSEPC---RPGFSC-INTVGSYTCQRNPLICARGYHASDDGAKCVDVNECETG 865

Query: 385  EHRCEQKANCNSL 347
             HRC +   C++L
Sbjct: 866  VHRCGEGQVCHNL 878


>AY130459-1|AAN05436.1| 1231|Homo sapiens fibulin 2 protein.
          Length = 1231

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 18/73 (24%), Positives = 31/73 (42%)
 Frame = -3

Query: 565  NMTECSSLLYPCITCNRSIDCRYGGFYNYTCTVKPKVVCQGLKTFNKSSMCRFCYQTDKW 386
            ++ EC+SL  PC        C      +YTC   P +  +G    +  + C    + +  
Sbjct: 857  DINECTSLSEPC---RPGFSC-INTVGSYTCQRNPLICARGYHASDDGAKCVDVNECETG 912

Query: 385  EHRCEQKANCNSL 347
             HRC +   C++L
Sbjct: 913  VHRCGEGQVCHNL 925


>AY130458-1|AAN05435.1| 1231|Homo sapiens fibulin 2 protein.
          Length = 1231

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 18/73 (24%), Positives = 30/73 (41%)
 Frame = -3

Query: 565  NMTECSSLLYPCITCNRSIDCRYGGFYNYTCTVKPKVVCQGLKTFNKSSMCRFCYQTDKW 386
            ++ EC+SL  PC        C      +YTC   P +  +G    +    C    + +  
Sbjct: 857  DINECTSLSEPC---RPGFSC-INTVGSYTCQRNPLICARGYHASDDGXKCVDVNECETG 912

Query: 385  EHRCEQKANCNSL 347
             HRC +   C++L
Sbjct: 913  VHRCGEGQVCHNL 925


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,697,344
Number of Sequences: 237096
Number of extensions: 2472521
Number of successful extensions: 9986
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9978
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -