Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_H08
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 29 2.6
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 29 2.6
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 29 2.6
AF040647-4|AAY55829.1| 152|Caenorhabditis elegans Hypothetical ... 29 3.5
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 28 6.1
U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated k... 28 6.1
U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated ... 28 6.1
U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated k... 28 6.1
D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase ... 28 6.1
AC084157-1|AAK68492.2| 185|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical
protein C14A4.1 protein.
Length = 298
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 220 LKCVRAFLFRYVHGYVLQRRADSFHVSLLRVRFLLHVQYAPVRHEELHARMALRDVLLMS 399
L C + LFR+ YVL + L+ R LL + VRHE A A+ +
Sbjct: 202 LYCEDSALFRHEVAYVLGQLQSPVATQELKDRLLLSTENCMVRHECAEALGAIANEECTE 261
Query: 400 VLRLMIRGSQ*II 438
+L+ + + ++
Sbjct: 262 ILKQYVNDEERVV 274
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/88 (22%), Positives = 34/88 (38%)
Frame = -3
Query: 471 HLTKNTVNP*KNYLLRATNHQAKNTHQKNIT*SHPSMKLFMTHRRILNM*KKPHTKKRNM 292
H NP +N NHQ N HQ+N + + +N + ++++
Sbjct: 213 HNQNQMQNPHQNQNHVQNNHQGANNHQQNNRRAMQQQPMSQNQANQINQMNQNQNQQQSH 272
Query: 291 KRVRTPLKNIPMNISKQKRTNTFQ*MKQ 208
+ T + Q+RTN + MKQ
Sbjct: 273 NQNMTQNQRNQTGPQNQQRTNDSRTMKQ 300
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/88 (22%), Positives = 34/88 (38%)
Frame = -3
Query: 471 HLTKNTVNP*KNYLLRATNHQAKNTHQKNIT*SHPSMKLFMTHRRILNM*KKPHTKKRNM 292
H NP +N NHQ N HQ+N + + +N + ++++
Sbjct: 213 HNQNQMQNPHQNQNHVQNNHQGANNHQQNNRRAMQQQPMSQNQANQINQMNQNQNQQQSH 272
Query: 291 KRVRTPLKNIPMNISKQKRTNTFQ*MKQ 208
+ T + Q+RTN + MKQ
Sbjct: 273 NQNMTQNQRNQTGPQNQQRTNDSRTMKQ 300
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/88 (22%), Positives = 34/88 (38%)
Frame = -3
Query: 471 HLTKNTVNP*KNYLLRATNHQAKNTHQKNIT*SHPSMKLFMTHRRILNM*KKPHTKKRNM 292
H NP +N NHQ N HQ+N + + +N + ++++
Sbjct: 213 HNQNQMQNPHQNQNHVQNNHQGANNHQQNNRRAMQQQPMSQNQANQINQMNQNQNQQQSH 272
Query: 291 KRVRTPLKNIPMNISKQKRTNTFQ*MKQ 208
+ T + Q+RTN + MKQ
Sbjct: 273 NQNMTQNQRNQTGPQNQQRTNDSRTMKQ 300
>AF040647-4|AAY55829.1| 152|Caenorhabditis elegans Hypothetical
protein F54D12.10 protein.
Length = 152
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 181 RCIAVEHCVLLHLLKCVRAFLFRYVHGYVLQRRADSFHVSLLRVRFLLHVQYAPVR 348
RC+ V C+L+H R +L Y G ++Q R D S++ ++ +P +
Sbjct: 49 RCVIVADCILVHSNSLNRCYL--YAVGDIIQVRNDRDGYSIMNETVAFRMRNSPYK 102
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/45 (22%), Positives = 25/45 (55%)
Frame = -3
Query: 612 SHQVKNLMKRNLPXTTMKKKKVLNPNQLKNHTKKNIVRKPTMKSL 478
SH+ K ++ P + +K + + +L+N +++++ P +K L
Sbjct: 61 SHEEKRILPLGTPGQQVGRKSLKDIRELRNSIDQSLIKPPELKML 105
>U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated
kinase CePAK protein.
Length = 572
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 576 PXTTMKKKKVLNPNQLKNHTKKNIVRKPTM 487
P T KKK + NP KN KK KP +
Sbjct: 38 PEATKKKKTMPNPFMKKNKDKKEASEKPVI 67
>U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated
kinase family protein1, isoform a protein.
Length = 572
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 576 PXTTMKKKKVLNPNQLKNHTKKNIVRKPTM 487
P T KKK + NP KN KK KP +
Sbjct: 38 PEATKKKKTMPNPFMKKNKDKKEASEKPVI 67
>U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated
kinase family protein1, isoform b protein.
Length = 569
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 576 PXTTMKKKKVLNPNQLKNHTKKNIVRKPTM 487
P T KKK + NP KN KK KP +
Sbjct: 38 PEATKKKKTMPNPFMKKNKDKKEASEKPVI 67
>D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase
protein.
Length = 569
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 576 PXTTMKKKKVLNPNQLKNHTKKNIVRKPTM 487
P T KKK + NP KN KK KP +
Sbjct: 38 PEATKKKKTMPNPFMKKNKDKKEASEKPVI 67
>AC084157-1|AAK68492.2| 185|Caenorhabditis elegans Hypothetical
protein Y46E12BR.1 protein.
Length = 185
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 325 HVQYAPVRHEELHARMALRDVLLMSVLRLMIRGSQ*IILLRVH 453
++ + P R +E+ ++ L D + V+RLM RG++ + ++ VH
Sbjct: 9 NLPHTPGR-QEIGRKLCLPDTRKVQVIRLMYRGAKGMWMINVH 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,616,581
Number of Sequences: 27780
Number of extensions: 149971
Number of successful extensions: 446
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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