Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_H07
(736 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 365 e-100
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 350 2e-95
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 271 1e-71
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 270 3e-71
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 208 1e-52
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 188 1e-46
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 186 7e-46
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 147 3e-34
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 120 3e-26
UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep: ... 113 3e-24
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 107 3e-22
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 103 3e-21
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 102 1e-20
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 101 1e-20
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 100 4e-20
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 99 6e-20
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 97 5e-19
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 91 2e-17
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 91 3e-17
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 89 1e-16
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 86 1e-15
UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S riboso... 85 2e-15
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 83 9e-15
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 80 5e-14
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 67 4e-10
UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-... 36 1.4
UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A6BE46 Cluster: Putative uncharacterized protein; n=2; ... 33 5.5
UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2; ... 33 5.5
UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11; Bacteri... 33 7.3
UniRef50_Q8GPX1 Cluster: Putative uncharacterized protein ORF SG... 33 9.6
UniRef50_A4RE30 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 365 bits (898), Expect = e-100
Identities = 167/227 (73%), Positives = 193/227 (85%)
Frame = -1
Query: 730 RQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTS 551
RQKKAH+MEIQ+NGGT+ +K+ WARE LE+ +PV+ VF QDEMID I TS
Sbjct: 174 RQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTS 233
Query: 550 RWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHK 371
RWHTKKLPRKTH+GLRKVACIGAWHP+RV+F+VARAGQKGYHHRTE+NKKIY+IGQG
Sbjct: 234 RWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLI 293
Query: 370 KDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRV 191
KDGK+IKNNAST+YDLS+KSI P+GGF HYGEV NDFVM+KGC +G KKR++TLRKSL V
Sbjct: 294 KDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLV 353
Query: 190 HTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 50
TKR ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LKKDRI +E
Sbjct: 354 QTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 350 bits (861), Expect = 2e-95
Identities = 160/226 (70%), Positives = 184/226 (81%)
Frame = -1
Query: 730 RQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTS 551
RQKKAHIMEIQLNGGT+ +KV WA+ LEK +PV SVF+Q E+ID I TS
Sbjct: 174 RQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTS 233
Query: 550 RWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHK 371
RWHTKKLPRKTHKGLRKVACIGAWHP+RV ++ARAGQKGYHHRTE+NKKI+RIG+G H
Sbjct: 234 RWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHM 293
Query: 370 KDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRV 191
+DGK++KNNAST YD++ KSITP+GGFPHYGEVNNDFVM+KGC G KKR+ITLRKSL V
Sbjct: 294 EDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLV 353
Query: 190 HTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 53
H R A+E I LKFIDT+SKFGHGRFQT +K AFMG KK +E
Sbjct: 354 HHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQKKHLEKE 399
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 271 bits (665), Expect = 1e-71
Identities = 128/225 (56%), Positives = 156/225 (69%)
Frame = -1
Query: 724 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 545
KKAH+ EIQ+NGGTI K++ A+ LEK + +DSVF Q E D RW
Sbjct: 230 KKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRW 289
Query: 544 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 365
LPRKTH+GLRKVACIGAWHPSRV +TVARAGQ GYHHRT +NKKIY++G+ + +
Sbjct: 290 GVACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSME- 348
Query: 364 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 185
N A+T YDL+ K+ITPMGGF YG V ND+VM+KG GP++R+ITLR+ + T
Sbjct: 349 ----PNQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVITLRRPMAPQT 404
Query: 184 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 50
R EKI LKFIDTSSK GHGRFQT +K+ + G LKKDRIR E
Sbjct: 405 SRKLTEKITLKFIDTSSKIGHGRFQTKKEKSQWYGPLKKDRIRRE 449
>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rpl-3 - Caenorhabditis elegans
Length = 353
Score = 270 bits (661), Expect = 3e-71
Identities = 128/190 (67%), Positives = 149/190 (78%)
Frame = -1
Query: 622 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 443
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 442 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 263
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 262 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 83
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 82 GTLKKDRIRE 53
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
B) (TARBP-B). - Bos Taurus
Length = 340
Score = 208 bits (508), Expect = 1e-52
Identities = 110/221 (49%), Positives = 145/221 (65%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
QKKAH+ E Q+N G + K+ WA + LE+ +PV+ +F + I +S
Sbjct: 132 QKKAHLTESQVNRGPVA-KLDWAHKKLEQQVPVNHIFRVRRLF-VIGTTKGKHYKGISSH 189
Query: 547 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 368
W+TKK+P KTH+ + ACI W +VA A QKG HH T +NKKIY+IGQG K
Sbjct: 190 WYTKKVPWKTHQEFHEAACI--WD----GLSVAWARQKGCHHCT-INKKIYKIGQGYLIK 242
Query: 367 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 188
+GK+IKNNAST+Y KSI+P+GG H G+V NDFVM+K C +G KKR+++L KSL +
Sbjct: 243 NGKIIKNNASTDYT---KSISPLGGCIHCGKVTNDFVMLKDCLVGTKKRVLSLCKSLLMR 299
Query: 187 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 65
TK+ L+K+N KFIDT+SKFGHG FQ +K FMG LKKD
Sbjct: 300 TKQQTLQKVNFKFIDTTSKFGHGCFQIVGEKKGFMGPLKKD 340
>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
Rattus norvegicus
Length = 380
Score = 188 bits (458), Expect = 1e-46
Identities = 110/226 (48%), Positives = 140/226 (61%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
QKKAH+MEIQ+ G + W RE + QDE+ID I T
Sbjct: 169 QKKAHLMEIQVMGHC---GLSW-REAVN----------QDEIIDVIKETKGNGYKGVTRV 214
Query: 547 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 368
+ P + +G K+ C+GAWHP+RV+F+VA+ GQKGYHH + NKKI +IGQG K
Sbjct: 215 DIQRNCPERPIEGCPKL-CVGAWHPARVTFSVAQVGQKGYHHNGD-NKKICKIGQGYLIK 272
Query: 367 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 188
DGK+IKNNA TEY LS+KSI +GGF HYGEV NDF+ +KGC + KK +T+ K L V
Sbjct: 273 DGKLIKNNAPTEYHLSDKSINLLGGFVHYGEVTNDFIRLKGCAVRTKKH-LTICKYLLVQ 331
Query: 187 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 50
T + AL+KI+ K DT+ K GHG FQT K AF+G LKK+ EE
Sbjct: 332 TIQWALKKIDPKLNDTTYKVGHGCFQTTEGKRAFIGPLKKECTAEE 377
>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
natans|Rep: Ribosomal protein L3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 370
Score = 186 bits (452), Expect = 7e-46
Identities = 95/214 (44%), Positives = 136/214 (63%)
Frame = -1
Query: 724 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 545
KK + E + GG+ + K+++ + K I ++S+F ++++ID I SRW
Sbjct: 158 KKKYFFETDIIGGSPKMKLEFWLKLNNKKIYINSIFHENDIIDAIGITKGHGTKGVVSRW 217
Query: 544 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 365
+LPRKTH+GLRKVACIG W PSRV++T++RAGQKGYH RT NKKIY+IG +++
Sbjct: 218 GITRLPRKTHRGLRKVACIGPWTPSRVAWTISRAGQKGYHKRTLFNKKIYKIGS---EEN 274
Query: 364 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 185
N+ S D KS+ MGGF +G +NND+++IKG G KR I LRK+++
Sbjct: 275 FSYYSNSLS---DSIVKSVNCMGGFKKFGFINNDYLIIKGSMTGSSKRPILLRKNIKNKI 331
Query: 184 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 83
EKI LK++DTSSK GHGR+++ ADK + M
Sbjct: 332 SSVITEKIILKYVDTSSKRGHGRYESSADKFSKM 365
>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L3P -
Pyrococcus furiosus
Length = 365
Score = 147 bits (356), Expect = 3e-34
Identities = 77/199 (38%), Positives = 113/199 (56%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
+KK +ME + G ++E+K + +E L K + V V + E++D I R
Sbjct: 177 KKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKR 236
Query: 547 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 368
W K K KG RKV IG WHP+RV +TV AGQ G+HHRTE+NK++ IG+
Sbjct: 237 WGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE----- 291
Query: 367 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 188
+GK +K + +TE + ITP GGFPHYG V +DF+MI G G KRII +R ++R
Sbjct: 292 NGK-LKLDENTEIE-----ITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPP 345
Query: 187 TKRAALEKINLKFIDTSSK 131
K+ +++ + ++ SK
Sbjct: 346 KKKPPVQRPQITYVSVESK 364
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 120 bits (290), Expect = 3e-26
Identities = 71/203 (34%), Positives = 107/203 (52%), Gaps = 2/203 (0%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
+KK I+EI++ G IE+++ +A+E L K + + VF + E++D I R
Sbjct: 154 KKKPEILEIRIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKR 213
Query: 547 WHTK-KLPRKTHKGL-RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 374
W K + + KG+ R V IG W P V ++V GQ GYH RTE NK+I +IG
Sbjct: 214 WGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIG---- 269
Query: 373 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 194
NN ITP GGF HYG + N++V++KG GP KR+I LR+++R
Sbjct: 270 --------NNGD--------EITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIVLRRAIR 313
Query: 193 VHTKRAALEKINLKFIDTSSKFG 125
+ ++ + +I T+SK G
Sbjct: 314 --PQEPLIKVPEITYISTTSKQG 334
>UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep:
Ribosomal protein L3 - Mus musculus (Mouse)
Length = 67
Score = 113 bits (273), Expect = 3e-24
Identities = 50/67 (74%), Positives = 59/67 (88%)
Frame = -1
Query: 364 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 185
GK+IKNNAST+YDLS+KSI P+GGF HYGEV NDF+M+KGC +G KKR++TLRKSL V T
Sbjct: 1 GKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQT 60
Query: 184 KRAALEK 164
KR ALEK
Sbjct: 61 KRRALEK 67
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 107 bits (257), Expect = 3e-22
Identities = 65/196 (33%), Positives = 97/196 (49%)
Frame = -1
Query: 712 IMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKK 533
IME+ L GG K++WA E L I +D V+ + +D + R+ K
Sbjct: 184 IMEVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELDVVGITKGKGWQGVIKRFGVKL 243
Query: 532 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVI 353
L K K R++ +G + V T+ +AGQ GYH RTE+NK+I RI
Sbjct: 244 LSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQMGYHKRTELNKRILRIS----------- 292
Query: 352 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 173
+ E +TP GGF HYGEV N +++++G GP KR++ R +R HT
Sbjct: 293 --------NPGESDVTPAGGFLHYGEVTNPYMVLEGSLPGPAKRLLRFRDPVRPHTN--- 341
Query: 172 LEKINLKFIDTSSKFG 125
+ ++L ++ TSSK G
Sbjct: 342 VFDVDLTYVSTSSKQG 357
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 103 bits (248), Expect = 3e-21
Identities = 68/200 (34%), Positives = 96/200 (48%)
Frame = -1
Query: 724 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 545
K IME+ L GG + ++ WA E L + + ++ VF ID I R+
Sbjct: 160 KSPEIMEMGLTGGDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGVTKGYGNQGVVRRF 219
Query: 544 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 365
K L K K R++ +G + V T+ +AGQ GYH RTE NK+I RI
Sbjct: 220 GVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQTGYHQRTEYNKRILRI-------- 271
Query: 364 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 185
A E E ITP GGF HYGEV N +++I+G GP KR+I R + R
Sbjct: 272 -------AGEE----ESQITPAGGFLHYGEVKNHYMIIQGSLPGPAKRLIRFRDAAR--- 317
Query: 184 KRAALEKINLKFIDTSSKFG 125
R +++ ++ T+SK G
Sbjct: 318 PRREQPPVDITYVSTASKQG 337
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 102 bits (244), Expect = 1e-20
Identities = 63/180 (35%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
+KK +ME ++ G + ++ ++A E L + I VF + E++D R
Sbjct: 160 KKKPDVMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGKGFQGVVKR 219
Query: 547 WHTKKLPRKTHKGL--RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 374
W RKT + R + IG PSRV +TV AGQ GYH RTE NK+I +IG+
Sbjct: 220 WGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQRTEHNKRILKIGE--- 276
Query: 373 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 194
DG + +TP GGF +YG V D++MI G GPKKR+I +R ++R
Sbjct: 277 --DG---------------EEVTPRGGFVNYGVVRGDYIMIHGTVPGPKKRLIRVRPAVR 319
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 101 bits (243), Expect = 1e-20
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 2/203 (0%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
+K +ME ++ GG + + ++A+ + K + + VFA E++D R
Sbjct: 157 KKVPELMENRIAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVR 216
Query: 547 WHTKKLPRKTHKGLRK--VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 374
W RK + +K V +G W+P R+ + V + GQ GYH RTE NK+I ++G
Sbjct: 217 WGIATQKRKHARTGKKRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRILKMG---- 272
Query: 373 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 194
D +E+ ITP GGF HYG + ND++M+KG GP KR++ +R ++R
Sbjct: 273 ---------------DKAEE-ITPAGGFLHYGLIRNDYIMLKGSIPGPVKRMVRIRPAVR 316
Query: 193 VHTKRAALEKINLKFIDTSSKFG 125
K + + ++ T SK G
Sbjct: 317 --PKNMPKQAPEITYLSTQSKMG 337
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 100 bits (239), Expect = 4e-20
Identities = 59/178 (33%), Positives = 87/178 (48%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
QKK +I E ++GG I + +E L K I +D +F +D R
Sbjct: 155 QKKPYIFEASVSGGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKR 214
Query: 547 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 368
W+ KK K+ K +R+V +G P V +TV RAGQ G+H R E +K+I +G
Sbjct: 215 WNVKKKQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFHQRVEYDKRIMIMG------ 268
Query: 367 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 194
+T+ D + I P GGF H+G V DF+++KG G +R+I LR +R
Sbjct: 269 ---------NTDDD--KLKINPDGGFKHFGLVKGDFIVLKGSVPGAYRRLIKLRSQIR 315
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 99 bits (238), Expect = 6e-20
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Frame = -1
Query: 724 KKAHIMEIQLNGG-TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
KK I E+++ GG +++++ ++A HL K I + + +D + R
Sbjct: 150 KKPEIFELRIGGGNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQR 209
Query: 547 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 368
+ K LPRK K R + +G WHP V TV +AGQ GY RT N ++ + +G
Sbjct: 210 FGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSKG---- 265
Query: 367 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 188
+A T I GGF HYG V ND+V++ G GP KR+I +R R
Sbjct: 266 ------EDADT--------INVRGGFLHYGLVKNDYVLLFGSVPGPAKRLIKMRDPAR-- 309
Query: 187 TKRAALEKINLKFIDTSSKFG 125
K ++ + L +I SK G
Sbjct: 310 QKVPDIDNVKLDYISLESKQG 330
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 96.7 bits (230), Expect = 5e-19
Identities = 59/199 (29%), Positives = 98/199 (49%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
+K I +I + G + K+++A L K + ++ VF + + +D I R
Sbjct: 147 KKTPEIFDIPIGGSDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKR 206
Query: 547 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 368
+H + K+ KG+RKV IG+ P R+ TV GQ GYH RTE NK I +IG+ ++ +
Sbjct: 207 FHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIGEPLNVE 266
Query: 367 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 188
GG+ YG+V +++KG GP+KR+I LR+++R
Sbjct: 267 -----------------------GGWVRYGQVIGPTILLKGSVPGPRKRLIILREAIRPP 303
Query: 187 TKRAALEKINLKFIDTSSK 131
K+ +E +++I S K
Sbjct: 304 RKQEKVE--GIEYISLSPK 320
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 91.5 bits (217), Expect = 2e-17
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 4/205 (1%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKP--IPVDSVFAQDEMIDCIXXXXXXXXXXXT 554
+K +ME ++ GGT+ D++++A + +E VF E D
Sbjct: 154 KKNPDVMETRVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITKGKGTQGPV 213
Query: 553 SRWHTKKLPRK-THKGLRK-VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 380
RW +K K +G R+ + +G W+PSRV TV + GQ GYH RTE+NK++ I G
Sbjct: 214 KRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDG 273
Query: 379 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 200
TP GGFP+YGEV+ + ++KG GP++R++ R +
Sbjct: 274 ---------------------DEPTPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVRFRPA 312
Query: 199 LRVHTKRAALEKINLKFIDTSSKFG 125
+R + + L+ ++++ T+S G
Sbjct: 313 VRPN-ESPRLDP-EVRYVSTASNQG 335
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 90.6 bits (215), Expect = 3e-17
Identities = 59/181 (32%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
+KK I+EI++ GGT+ +++ +A + L + VD VF + + ID I R
Sbjct: 215 KKKPEIIEIKIGGGTLSERIDYAEKLLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKR 274
Query: 547 WHTKKLPR--KTHKGLRKVACIGAWHPSRVSFT-VARAGQKGYHHRTEMNKKIYRIGQGI 377
+ K+LPR K KG RK IG+ P + + + GQ G+H RTE NK+I +IG
Sbjct: 275 FGVKELPRWHKHRKGSRK---IGSRSPGFGTMSETPQPGQMGFHRRTEYNKRIIKIG--- 328
Query: 376 HKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSL 197
++ +TP GGF YG V ++M+ G +GP+KR++ LR +
Sbjct: 329 -----------------INGWEVTPKGGFLGYGIVYGPYIMLHGSIIGPRKRLLVLRHPI 371
Query: 196 R 194
R
Sbjct: 372 R 372
>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
symbiosum
Length = 328
Score = 88.6 bits (210), Expect = 1e-16
Identities = 51/189 (26%), Positives = 88/189 (46%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
QK+ +I E + GG+++++ + ++ L K + V +D R
Sbjct: 153 QKRPYIFEAPVRGGSMKERFAYLKDLLGKTVKASDVLEPGAGVDVAAITKGKGWQGVIQR 212
Query: 547 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 368
K+ K+ K +R++ +G P V +TV RAGQ G+H R E NK+I +G
Sbjct: 213 MGAKRKQHKSRKTVRELGSLGPISPQNVMYTVPRAGQMGFHQRIEYNKRIMAVGSA---- 268
Query: 367 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 188
G+ + +I P GG+ H+G V D++++KG G +R++ LR +R
Sbjct: 269 -GE-------------DDAINPSGGYKHFGMVKGDYIVLKGSVPGTYRRLVKLRAQIRNA 314
Query: 187 TKRAALEKI 161
KR + I
Sbjct: 315 PKRTSKPNI 323
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 85.8 bits (203), Expect = 1e-15
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 2/180 (1%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
+KK ++EI + GG E + A E L K + + VF + + ID I R
Sbjct: 153 KKKPELIEIAV-GGPPEKALSLALEKLGKDLTISDVFKEGDYIDVIAVTKGKGFQGSVKR 211
Query: 547 WHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 374
+ +++PR K KG ++ +G P+ + F GQ G+H RTE NK+I ++G
Sbjct: 212 FGVEEMPRWHKHRKGHSRIGSVGPQKPA-IMFYTPFPGQLGFHQRTEYNKRILKVG---- 266
Query: 373 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 194
D + S K I P GG+PHYG V + F++++G G KR++ LR ++R
Sbjct: 267 --DAE------------SLKEINPPGGWPHYGLVRSQFIIVEGSVPGAVKRLVRLRHAIR 312
>UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S ribosomal
protein L3 (L4); n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L3 (L4) - Macaca
mulatta
Length = 153
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = -1
Query: 238 MGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRI 59
+G KK+++TL KS V TK ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LKKD+
Sbjct: 88 VGTKKQVLTLCKSSLVQTKWRALEKIDLKFIDTTSKFGHGRFQTIGEKKAFMGPLKKDQT 147
Query: 58 REE 50
+E
Sbjct: 148 AKE 150
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 82.6 bits (195), Expect = 9e-15
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
+K ++EIQ+ GG + ++ +A L K I + VF + ++ID + R
Sbjct: 173 KKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAGVIKR 232
Query: 547 WHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 374
+ +LPR K KG RK+ G S+T + GQ G+H RTE NK+I +IG
Sbjct: 233 YSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD--- 287
Query: 373 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 194
K I P GGF YG V N +V+++G +G KKR I LR+ +R
Sbjct: 288 -----------------EPKEINPAGGFVRYGIVRNTYVLLEGSILGSKKRPIFLREPVR 330
>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 173
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/102 (39%), Positives = 59/102 (57%)
Frame = +2
Query: 422 VMITFLTSTSYSERHPRRMPSSNAGNFPKXXXXXXXXXXXXPTRSDTFVSFALGDTNAVN 601
+++T LTS+ + MPS+N N + P+ DT + GD+N +N
Sbjct: 1 MVVTVLTSSGNGPVNVSWMPSTNTSNLSQTSVGLSWQFLGTPSVGDTLETVTFGDSNDIN 60
Query: 602 HFILGKHRIDRDRFLQMFSGPFHFVLDGTTVKLDFHNVSLLL 727
HFIL ++R++R+ F ++F GP +FV DGTTV LDF VS LL
Sbjct: 61 HFILFENRVNRNFFFKVFFGPVNFVGDGTTVDLDFSQVSFLL 102
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 80.2 bits (189), Expect = 5e-14
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 6/207 (2%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKV-KWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTS 551
+KK ++EI++ G + K+ +A++ L I V+ VF + +++D I
Sbjct: 160 KKKPDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIK 219
Query: 550 RWHTKKLPR--KTHKGLRKVACIGAWHPSRVSF-TVARAGQKGYHHRTEMNKKIYRIGQG 380
RW K+LPR K KG R+ IGA R +F +AGQ G+H RTE NK+I I
Sbjct: 220 RWGVKELPRWHKHRKGSRR---IGARSHGRSTFWETPQAGQTGFHRRTEYNKRILMIDDD 276
Query: 379 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 200
+K +TP GGF YG V + FVM+ G G KR I +R +
Sbjct: 277 GYK--------------------VTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVMRWA 316
Query: 199 LRVHT--KRAALEKINLKFIDTSSKFG 125
+R + + K + +I +SK G
Sbjct: 317 IRPPEWYLKLGVRKPEITYISLASKQG 343
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 67.3 bits (157), Expect = 4e-10
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Frame = -1
Query: 727 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 548
+K I+E+++ G +E +++A+ L + + V+ V + +D I R
Sbjct: 179 KKAPDILEVKVGGSPVE-ALEYAKGKLGQLVDVEEVIEAGKFVDVIGVTKGKGFQGVIKR 237
Query: 547 WHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 374
+ K+LP+ K KG R+V +W S+ V + GQ GYH RT+ NK++ I
Sbjct: 238 FGVKELPKWHKHRKGSRRVGA-RSWGKGTSSY-VPQPGQMGYHRRTDYNKRVLMISDDPS 295
Query: 373 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 194
K I GG+ HYG V + +V++KG GP KR I +R +R
Sbjct: 296 K--------------------INVEGGWLHYGLVKSKYVVLKGSVFGPPKRPIIMRLPVR 335
>UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-12
- Homo sapiens (Human)
Length = 103
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -2
Query: 198 CVCIQRGLH*KRSTSNSLTPRPSSVMVDSRRRLTRLHSWVH 76
C C + G +R T +SLTP PS M SR R HSW H
Sbjct: 63 CWCRRSGGLWRRLTLSSLTPPPSLAMAASRPWRRRKHSWDH 103
>UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1482
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +2
Query: 209 KSNDTLFRSHAATLDHHKVVVYFTIMGETSHWCNGFLRQVILSRCIVFNNFAILFVDSLS 388
+ N+ + TL H ++ YF + +SH ++I + +++NNFA +F+ L
Sbjct: 450 QKNNIKYNIKWLTLFFHSLIQYFVYLNNSSHILINHKDKIIFIKHLLYNNFAQMFLKYL- 508
Query: 389 NTIDFLVHFSTVMITFLTST 448
D V+F+ + I + S+
Sbjct: 509 --CDNYVYFTPINILSIYSS 526
>UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 685
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -1
Query: 397 YRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 218
YR G H DG + NNA++++ +K +P F GE + ++ G + K
Sbjct: 567 YRSSWGYHGDDGAIFLNNANSDFSYYKKE-SPSDDFGAKGEFGANDIVGVGLNLETGKGF 625
Query: 217 ITLRKSLR 194
+TL +LR
Sbjct: 626 VTLNGNLR 633
>UniRef50_A6BE46 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Dorea longicatena DSM 13814
Length = 152
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 266 VVYFTIMGETSHWCNGFLRQVILSRCIVF 352
+++FT GE HW + FLRQV+ RC +F
Sbjct: 41 MMFFTYQGELVHWQDDFLRQVL--RCSIF 67
>UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2;
Polaribacter|Rep: Putative uncharacterized protein -
Polaribacter dokdonensis MED152
Length = 587
Score = 33.5 bits (73), Expect = 5.5
Identities = 25/90 (27%), Positives = 39/90 (43%)
Frame = -1
Query: 439 QKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 260
++ H E++K +G+GI+ + + N S YD S GF + N F
Sbjct: 140 EQNIHLVAEISKSRPYVGEGIYVEYRLYVSENVSV-YDTSVTEAPQYNGFWNQEIKINGF 198
Query: 259 VMIKGCCMGPKKRIITLRKSLRVHTKRAAL 170
+ G G R I L+K+L + TK L
Sbjct: 199 PVKMGKYNGENYRYIVLQKALLIPTKTGRL 228
>UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11;
Bacteria|Rep: 50S ribosomal protein L3 - Mycoplasma
mobile
Length = 297
Score = 33.1 bits (72), Expect = 7.3
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -1
Query: 277 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLK 152
++ N+ +++KG GPK + ++ +++ R A+E +N+K
Sbjct: 181 DIKNNILLVKGSVPGPKNCFLIIKSAIKNLPSREAIELVNIK 222
>UniRef50_Q8GPX1 Cluster: Putative uncharacterized protein ORF SG31;
n=2; Pseudomonadaceae|Rep: Putative uncharacterized
protein ORF SG31 - Pseudomonas aeruginosa
Length = 161
Score = 32.7 bits (71), Expect = 9.6
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1
Query: 220 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAA 89
I R + + KR+AL+K+ K I+ + GHGR P+D+AA
Sbjct: 52 IAARRSTYKQLNKRSALDKVKRK-IEKAKGTGHGRTAVPSDQAA 94
>UniRef50_A4RE30 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 683
Score = 32.7 bits (71), Expect = 9.6
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 206 SKSNDTLFRSHAATLDHHKVVVYFTIMGETSHWCNGFLRQVILSRCIVFNNFAILFVDSL 385
S N+ LF+ LDH T++ + HWC L V ++ +F + + S
Sbjct: 8 SDDNNPLFKESCQALDHATEFARDTLVNK-EHWCGWVLSNVTVTAEWIFLQYILGLEMSN 66
Query: 386 SNTIDFLVHFST 421
+ FL HF++
Sbjct: 67 EDRRGFLKHFTS 78
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,906,893
Number of Sequences: 1657284
Number of extensions: 15938967
Number of successful extensions: 38984
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 37749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38968
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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