Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_H06
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 281 3e-76
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 281 3e-76
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 281 3e-76
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 281 3e-76
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 281 3e-76
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 281 3e-76
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 280 5e-76
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 280 5e-76
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 280 5e-76
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 274 3e-74
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 269 1e-72
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 148 4e-36
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 127 6e-30
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 119 2e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 99 1e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 89 2e-18
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 77 1e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.53
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.53
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.53
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 3.7
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 3.7
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 3.7
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 6.5
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 6.5
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 6.5
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 6.5
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 27 8.6
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 27 8.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 281 bits (689), Expect = 3e-76
Identities = 129/136 (94%), Positives = 133/136 (97%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
YELPDGQVI +GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 282 QEYDESGPSIVHRKCF 235
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 281 bits (689), Expect = 3e-76
Identities = 129/136 (94%), Positives = 133/136 (97%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
YELPDGQVI +GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 282 QEYDESGPSIVHRKCF 235
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 281 bits (689), Expect = 3e-76
Identities = 129/136 (94%), Positives = 133/136 (97%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
YELPDGQVI +GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 282 QEYDESGPSIVHRKCF 235
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 281 bits (689), Expect = 3e-76
Identities = 129/136 (94%), Positives = 133/136 (97%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
YELPDGQVI +GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 197 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 256
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 257 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 316
Query: 282 QEYDESGPSIVHRKCF 235
QEYDESGPSIVHRKCF
Sbjct: 317 QEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 281 bits (689), Expect = 3e-76
Identities = 129/136 (94%), Positives = 133/136 (97%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
YELPDGQVI +GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 227 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 286
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 287 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 346
Query: 282 QEYDESGPSIVHRKCF 235
QEYDESGPSIVHRKCF
Sbjct: 347 QEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 281 bits (689), Expect = 3e-76
Identities = 129/136 (94%), Positives = 133/136 (97%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
YELPDGQVI +GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 282 QEYDESGPSIVHRKCF 235
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 280 bits (687), Expect = 5e-76
Identities = 128/136 (94%), Positives = 133/136 (97%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
YELPDGQVI +GNERFRCPEA+FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 282 QEYDESGPSIVHRKCF 235
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 280 bits (687), Expect = 5e-76
Identities = 128/136 (94%), Positives = 133/136 (97%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
YELPDGQVI +GNERFRCPEA+FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 282 QEYDESGPSIVHRKCF 235
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 280 bits (687), Expect = 5e-76
Identities = 128/136 (94%), Positives = 133/136 (97%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
YELPDGQVI +GNERFRCPEA+FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 282 QEYDESGPSIVHRKCF 235
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 274 bits (672), Expect = 3e-74
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
YELPDGQVI +GNERFRCPEA+FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 359
Query: 282 QEYDESGPSIVHRKCF 235
QEYDESGPSIVHRKCF
Sbjct: 360 QEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 269 bits (659), Expect = 1e-72
Identities = 124/136 (91%), Positives = 128/136 (94%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
YELPDGQVI IGNERFRCPE LFQP+ +GME GIHETTY SIMKCDVDIRKDLYANTVL
Sbjct: 240 YELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVL 299
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 300 SGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 359
Query: 282 QEYDESGPSIVHRKCF 235
QEYDESGPSIVHRKCF
Sbjct: 360 QEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 148 bits (358), Expect = 4e-36
Identities = 68/136 (50%), Positives = 91/136 (66%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
Y LPD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N VL
Sbjct: 239 YALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVL 298
Query: 462 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 283
SGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K
Sbjct: 299 SGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGK 358
Query: 282 QEYDESGPSIVHRKCF 235
+EY++ G S +H++ F
Sbjct: 359 KEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 127 bits (307), Expect = 6e-30
Identities = 64/140 (45%), Positives = 86/140 (61%), Gaps = 13/140 (9%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 463
Y LPDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y + VL
Sbjct: 244 YTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVL 303
Query: 462 SGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILAS 316
SGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+
Sbjct: 304 SGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLAN 363
Query: 315 L--STFQQMWISKQEYDESG 262
L Q W+SK+EY+E G
Sbjct: 364 LMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 119 bits (286), Expect = 2e-27
Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Frame = -2
Query: 642 YELPDGQVIXIGNERFRCPEALFQPSXLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 478
Y P+G G ER + PE LF L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 477 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 307
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 306 FQQMWISKQEYDESGPSIVHRKC 238
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 99 bits (238), Expect = 1e-21
Identities = 41/112 (36%), Positives = 73/112 (65%)
Frame = -2
Query: 612 IGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 433
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 432 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 277
A+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 89.0 bits (211), Expect = 2e-18
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 17/139 (12%)
Frame = -2
Query: 618 IXIGNERFRCPEALFQPSXLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 442
+ +G ERF PE F P E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 441 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 310
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 309 TFQQMWISKQEYDESGPSI 253
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -2
Query: 618 IXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 439
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 438 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 268
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 267 SGPSIVHRKCF*T 229
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -2
Query: 618 IXIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 439
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 438 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 268
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 267 SGPSIVHRKCF*T 229
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -2
Query: 516 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 352
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 351 ----YSVWIGGSILASL-STFQQMWISKQEY 274
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 340 PYGVLPLWRSNDLNLHCRWGESCD 411
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 340 PYGVLPLWRSNDLNLHCRWGESCD 411
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 340 PYGVLPLWRSNDLNLHCRWGESCD 411
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 610 RKRKIPLPRGSLPTLVXGYGSLRHPRDHI*LHHEVRRG 497
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 610 RKRKIPLPRGSLPTLVXGYGSLRHPRDHI*LHHEVRRG 497
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 610 RKRKIPLPRGSLPTLVXGYGSLRHPRDHI*LHHEVRRG 497
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 610 RKRKIPLPRGSLPTLVXGYGSLRHPRDHI*LHHEVRRG 497
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 610 RKRKIPLPRGSLPTLVXGYGSLRHPRDHI*LHHEVRRG 497
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 176 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 268
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 279 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 178
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 176 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 268
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 360 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 199
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 589 PRGSLPTLVXGYGSLRHPRDHI*LHHEVRRGHP 491
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 589 PRGSLPTLVXGYGSLRHPRDHI*LHHEVRRGHP 491
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,513,331
Number of Sequences: 27780
Number of extensions: 302319
Number of successful extensions: 837
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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