Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_H04
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.53 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   5.0  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   5.0  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   5.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 150 IFFF*MFHIVLYLFYYVHSYYIIIXLVXCSRHNIKVXYI-HVFCTF 16
           +F   +++ V+ LF+ +  YY     +  + H + +  I H FC F
Sbjct: 128 LFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAF 173


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +1

Query: 532 IVSTCSILGVRVYLGSL 582
           ++S C+ +GVR+Y+ ++
Sbjct: 98  MISRCNAVGVRIYVDTV 114


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +1

Query: 532 IVSTCSILGVRVYLGSL 582
           ++S C+ +GVR+Y+ ++
Sbjct: 99  MISRCNAVGVRIYVDTV 115


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +1

Query: 532 IVSTCSILGVRVYLGSL 582
           ++S C+ +GVR+Y+ ++
Sbjct: 99  MISRCNAVGVRIYVDTV 115


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 359 PPKIDLPTT 385
           PPK +LPTT
Sbjct: 16  PPKFELPTT 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,426
Number of Sequences: 336
Number of extensions: 3277
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)