Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_G12
         (485 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023588-1|AAH23588.1|  164|Homo sapiens ribonuclease H2, subuni...    33   0.40 
AK024627-1|BAB14937.1|  163|Homo sapiens protein ( Homo sapiens ...    33   0.40 
AF346606-1|AAO49177.1|  164|Homo sapiens AYP1 protein.                 33   0.40 
AF346605-1|AAO49176.1|  164|Homo sapiens AYP1 protein.                 33   0.40 
AF312034-1|AAL87739.1|  164|Homo sapiens RNase H1 small subunit ...    33   0.40 

>BC023588-1|AAH23588.1|  164|Homo sapiens ribonuclease H2, subunit C
           protein.
          Length = 164

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 21/99 (21%)
 Frame = -2

Query: 397 LSATFRGHPLDGTQITFPEGYRA-VLVTETKR--------------------PLTEDAER 281
           L  +FRG  L G ++  P G    V+VTE K+                    PL  D +R
Sbjct: 59  LEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKKVSMGKPDPLRDSGTDDQEEEPLERDFDR 118

Query: 280 KFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAV 164
               T  F  FT W  +  P  +  +  A+ W  +A A+
Sbjct: 119 FIGATANFSRFTLWGLETIPGPDAKVRGALTWPSLAAAI 157


>AK024627-1|BAB14937.1|  163|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ20974 fis, clone ADSU01596. ).
          Length = 163

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 20/98 (20%)
 Frame = -2

Query: 397 LSATFRGHPLDGTQITFPEGYRA-VLVTETK-------------------RPLTEDAERK 278
           L  +FRG  L G ++  P G    V+VTE K                    PL  D +R 
Sbjct: 59  LEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKVSMGKPDPLRDSGTDDQEEEPLERDFDRF 118

Query: 277 FQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAV 164
              T  F  FT W  +  P  +  +  A+ W  +A A+
Sbjct: 119 IGATANFSRFTLWGLETIPGPDAKVRGALTWPSLAAAI 156


>AF346606-1|AAO49177.1|  164|Homo sapiens AYP1 protein.
          Length = 164

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 21/99 (21%)
 Frame = -2

Query: 397 LSATFRGHPLDGTQITFPEGYRA-VLVTETKR--------------------PLTEDAER 281
           L  +FRG  L G ++  P G    V+VTE K+                    PL  D +R
Sbjct: 59  LEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKKVSMGKPDPLRDSGTDDQEEEPLERDFDR 118

Query: 280 KFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAV 164
               T  F  FT W  +  P  +  +  A+ W  +A A+
Sbjct: 119 FIGATANFSRFTLWGLETIPGPDAKVRGALTWPSLAAAI 157


>AF346605-1|AAO49176.1|  164|Homo sapiens AYP1 protein.
          Length = 164

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 21/99 (21%)
 Frame = -2

Query: 397 LSATFRGHPLDGTQITFPEGYRA-VLVTETKR--------------------PLTEDAER 281
           L  +FRG  L G ++  P G    V+VTE K+                    PL  D +R
Sbjct: 59  LEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKKVSMGKPDPLRDSGTDDQEEEPLERDFDR 118

Query: 280 KFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAV 164
               T  F  FT W  +  P  +  +  A+ W  +A A+
Sbjct: 119 FIGATANFSRFTLWGLETIPGPDAKVRGALTWPSLAAAI 157


>AF312034-1|AAL87739.1|  164|Homo sapiens RNase H1 small subunit
           protein.
          Length = 164

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 21/99 (21%)
 Frame = -2

Query: 397 LSATFRGHPLDGTQITFPEGYRA-VLVTETKR--------------------PLTEDAER 281
           L  +FRG  L G ++  P G    V+VTE K+                    PL  D +R
Sbjct: 59  LEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKKVSMGKPDPLRDSGTDDQEEEPLERDFDR 118

Query: 280 KFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAV 164
               T  F  FT W  +  P  +  +  A+ W  +A A+
Sbjct: 119 FIGATANFSRFTLWGLETIPGPDAKVRGALTWPSLAAAI 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,503,458
Number of Sequences: 237096
Number of extensions: 1118794
Number of successful extensions: 2274
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2274
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)