Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_G11
(453 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542121-1|CAG46918.1| 105|Homo sapiens NDUFB2 protein. 61 2e-09
AF050639-1|AAD05428.1| 105|Homo sapiens NADH-ubiquinone oxidore... 61 2e-09
BC063026-1|AAH63026.1| 95|Homo sapiens NDUFB2 protein protein. 59 6e-09
AC006344-2|AAD43191.1| 95|Homo sapiens NADH-ubiquinone oxidore... 59 6e-09
BC114486-1|AAI14487.1| 1281|Homo sapiens SH3TC2 protein protein. 31 2.4
BC113879-1|AAI13880.1| 1288|Homo sapiens SH3 domain and tetratri... 31 2.4
AY341075-1|AAR03497.1| 1288|Homo sapiens KIAA1985 protein. 31 2.4
AK127248-1|BAC86899.1| 596|Homo sapiens protein ( Homo sapiens ... 31 2.4
AB075865-1|BAB85571.1| 955|Homo sapiens KIAA1985 protein protein. 31 2.4
D31765-1|BAA06543.1| 903|Homo sapiens KIAA0061 protein. 30 3.2
BC011529-1|AAH11529.1| 1024|Homo sapiens processing of precursor... 30 3.2
AK057830-1|BAB71591.1| 165|Homo sapiens protein ( Homo sapiens ... 29 5.6
AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein. 29 7.4
U39403-1|AAC99999.1| 500|Homo sapiens protein ( Human fetal cra... 29 9.8
D30755-1|BAA06416.2| 636|Homo sapiens KIAA0113 protein. 29 9.8
BC014008-1|AAH14008.1| 636|Homo sapiens TNIP1 protein protein. 29 9.8
BC012133-1|AAH12133.1| 636|Homo sapiens TNFAIP3 interacting pro... 29 9.8
AY012155-1|AAG42154.1| 636|Homo sapiens virion-associated nucle... 29 9.8
AJ011896-1|CAA09856.1| 635|Homo sapiens Naf1 beta protein protein. 29 9.8
AJ011895-1|CAA09855.1| 636|Homo sapiens Naf1 alpha protein prot... 29 9.8
AB252982-1|BAF48799.1| 630|Homo sapiens Nef-associated factor 1... 29 9.8
AB252973-1|BAF48790.1| 635|Homo sapiens Nef-associated factor 1... 29 9.8
AB252972-1|BAF48789.1| 636|Homo sapiens Nef-associated factor 1... 29 9.8
AB252971-1|BAF48788.1| 635|Homo sapiens Nef-associated factor 1... 29 9.8
AB252970-1|BAF48787.1| 636|Homo sapiens Nef-associated factor 1... 29 9.8
>CR542121-1|CAG46918.1| 105|Homo sapiens NDUFB2 protein.
Length = 105
Score = 61.3 bits (142), Expect = 2e-09
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = -3
Query: 283 RNAGHGVWT---YRVPPPMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPS 113
R+AG GV YR P + ++ + ++ GL W+WIL+ + E + G +PY DPS
Sbjct: 32 RHAGGGVHIEPRYRQFPQL-TRSQVFQSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPS 90
Query: 112 TWTDEELGIP 83
WTDEELGIP
Sbjct: 91 QWTDEELGIP 100
>AF050639-1|AAD05428.1| 105|Homo sapiens NADH-ubiquinone
oxidoreductase AGGG subunit protein.
Length = 105
Score = 61.3 bits (142), Expect = 2e-09
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = -3
Query: 283 RNAGHGVWT---YRVPPPMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPS 113
R+AG GV YR P + ++ + ++ GL W+WIL+ + E + G +PY DPS
Sbjct: 32 RHAGGGVHIEPRYRQFPQL-TRSQVFQSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPS 90
Query: 112 TWTDEELGIP 83
WTDEELGIP
Sbjct: 91 QWTDEELGIP 100
>BC063026-1|AAH63026.1| 95|Homo sapiens NDUFB2 protein protein.
Length = 95
Score = 59.3 bits (137), Expect = 6e-09
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = -3
Query: 241 PMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPSTWTDEELGIP 83
P ++ + ++ GL W+WIL+ + E + G +PY DPS WTDEELGIP
Sbjct: 38 PQLTRSQVFQSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPSQWTDEELGIP 90
>AC006344-2|AAD43191.1| 95|Homo sapiens NADH-ubiquinone
oxidoreductase AGGG subunit protein.
Length = 95
Score = 59.3 bits (137), Expect = 6e-09
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = -3
Query: 241 PMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPSTWTDEELGIP 83
P ++ + ++ GL W+WIL+ + E + G +PY DPS WTDEELGIP
Sbjct: 38 PQLTRSQVFQSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPSQWTDEELGIP 90
>BC114486-1|AAI14487.1| 1281|Homo sapiens SH3TC2 protein protein.
Length = 1281
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 115 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 276
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 883 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 933
>BC113879-1|AAI13880.1| 1288|Homo sapiens SH3 domain and
tetratricopeptide repeats 2 protein.
Length = 1288
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 115 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 276
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 890 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 940
>AY341075-1|AAR03497.1| 1288|Homo sapiens KIAA1985 protein.
Length = 1288
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 115 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 276
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 890 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 940
>AK127248-1|BAC86899.1| 596|Homo sapiens protein ( Homo sapiens
cDNA FLJ45315 fis, clone BRHIP3005231. ).
Length = 596
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 115 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 276
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 437 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 487
>AB075865-1|BAB85571.1| 955|Homo sapiens KIAA1985 protein protein.
Length = 955
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 115 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 276
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 557 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 607
>D31765-1|BAA06543.1| 903|Homo sapiens KIAA0061 protein.
Length = 903
Score = 30.3 bits (65), Expect = 3.2
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Frame = +2
Query: 98 FISPCTGINIRPLTSYMLRF------SCNVIQNPPPAQSTKPLS*PNRFFGRHWWRYTV- 256
+ISP TGI I LT M RF S +++ A S + WW T
Sbjct: 292 WISPTTGIIISDLTMEMNRFRLIGPLSHSILTEAIKAASVHTVGEDTEETPHRWWIETCK 351
Query: 257 RPNSMS--CISFGLFQAVASVLQPTE 328
+P+S+S C +F+ + + P E
Sbjct: 352 KPDSVSLHCRQEAIFELLGGITSPAE 377
>BC011529-1|AAH11529.1| 1024|Homo sapiens processing of precursor 1,
ribonuclease P/MRP subunit (S. cerevisiae) protein.
Length = 1024
Score = 30.3 bits (65), Expect = 3.2
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Frame = +2
Query: 98 FISPCTGINIRPLTSYMLRF------SCNVIQNPPPAQSTKPLS*PNRFFGRHWWRYTV- 256
+ISP TGI I LT M RF S +++ A S + WW T
Sbjct: 413 WISPTTGIIISDLTMEMNRFRLIGPLSHSILTEAIKAASVHTVGEDTEETPHRWWIETCK 472
Query: 257 RPNSMS--CISFGLFQAVASVLQPTE 328
+P+S+S C +F+ + + P E
Sbjct: 473 KPDSVSLHCRQEAIFELLGGITSPAE 498
>AK057830-1|BAB71591.1| 165|Homo sapiens protein ( Homo sapiens
cDNA FLJ25101 fis, clone CBR01328. ).
Length = 165
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 262 WTYRVPPPMPSKKSIRLAQGLGGLCW 185
W YR PPP P+ + G+ LCW
Sbjct: 55 WYYRCPPPQPANFCVFTRDGV-SLCW 79
>AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.
Length = 1183
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = -3
Query: 307 GDSLKQTKRNAGHGVWTYRVPPPMP-SKKSIRLAQGLGGLCWWWI-LYHIATEPEHITGE 134
G +++Q +R+ G P P S+K +R G G C WI + + +P + +
Sbjct: 379 GFTIRQGERSLGSERKQVICTLPEPKSRKQVRKFLGAAGFCRLWIPNFAVLAKPLYEVTK 438
Query: 133 WPYIDPSTWTDEE 95
W +P W ++
Sbjct: 439 WGDREPFEWGSQQ 451
>U39403-1|AAC99999.1| 500|Homo sapiens protein ( Human fetal
craniofacial mRNA, partial cds. ).
Length = 500
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 400 YHVEPHPEHLCGAYPYAYP 418
>D30755-1|BAA06416.2| 636|Homo sapiens KIAA0113 protein.
Length = 636
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 535 YHVEPHPEHLCGAYPYAYP 553
>BC014008-1|AAH14008.1| 636|Homo sapiens TNIP1 protein protein.
Length = 636
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 535 YHVEPHPEHLCGAYPYAYP 553
>BC012133-1|AAH12133.1| 636|Homo sapiens TNFAIP3 interacting
protein 1 protein.
Length = 636
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 535 YHVEPHPEHLCGAYPYAYP 553
>AY012155-1|AAG42154.1| 636|Homo sapiens virion-associated
nuclear-shuttling protein protein.
Length = 636
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 535 YHVEPHPEHLCGAYPYAYP 553
>AJ011896-1|CAA09856.1| 635|Homo sapiens Naf1 beta protein protein.
Length = 635
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 535 YHVEPHPEHLCGAYPYAYP 553
>AJ011895-1|CAA09855.1| 636|Homo sapiens Naf1 alpha protein
protein.
Length = 636
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 535 YHVEPHPEHLCGAYPYAYP 553
>AB252982-1|BAF48799.1| 630|Homo sapiens Nef-associated factor 1
SNP protein.
Length = 630
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 535 YHVEPHPEHLCGAYPYAYP 553
>AB252973-1|BAF48790.1| 635|Homo sapiens Nef-associated factor 1
isoform 4 protein.
Length = 635
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 535 YHVEPHPEHLCGAYPYAYP 553
>AB252972-1|BAF48789.1| 636|Homo sapiens Nef-associated factor 1
isoform 3 protein.
Length = 636
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 535 YHVEPHPEHLCGAYPYAYP 553
>AB252971-1|BAF48788.1| 635|Homo sapiens Nef-associated factor 1
isoform 2 protein.
Length = 635
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 535 YHVEPHPEHLCGAYPYAYP 553
>AB252970-1|BAF48787.1| 636|Homo sapiens Nef-associated factor 1
isoform 1 protein.
Length = 636
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 172 YHIATEPEHITGEWPYIDP 116
YH+ PEH+ G +PY P
Sbjct: 535 YHVEPHPEHLCGAYPYAYP 553
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,172,968
Number of Sequences: 237096
Number of extensions: 1472481
Number of successful extensions: 3560
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3559
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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