Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_G10
(705 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S82447-1|AAB37682.1| 125|Homo sapiens GCN5-like 1 protein. 151 2e-36
D64007-1|BAA10887.1| 125|Homo sapiens RT14 protein. 151 2e-36
BC132795-1|AAI32796.1| 125|Homo sapiens biogenesis of lysosome-... 151 2e-36
BC130640-1|AAI30641.1| 125|Homo sapiens biogenesis of lysosome-... 151 2e-36
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 31 5.3
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 31 5.3
BC057227-1|AAH57227.1| 318|Homo sapiens Unknown (protein for IM... 31 5.3
BC045172-1|AAH45172.2| 749|Homo sapiens LAMB4 protein protein. 30 7.0
AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain pr... 30 7.0
>S82447-1|AAB37682.1| 125|Homo sapiens GCN5-like 1 protein.
Length = 125
Score = 151 bits (366), Expect = 2e-36
Identities = 72/111 (64%), Positives = 87/111 (78%)
Frame = -2
Query: 365 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 186
KEHQAKQ ++ +QE++R+E ITAA LT+ALVDHLNVGVAQAY+NQ+KLD E K L
Sbjct: 7 KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66
Query: 185 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE 33
A F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I LE Y+
Sbjct: 67 AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117
>D64007-1|BAA10887.1| 125|Homo sapiens RT14 protein.
Length = 125
Score = 151 bits (366), Expect = 2e-36
Identities = 72/111 (64%), Positives = 87/111 (78%)
Frame = -2
Query: 365 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 186
KEHQAKQ ++ +QE++R+E ITAA LT+ALVDHLNVGVAQAY+NQ+KLD E K L
Sbjct: 7 KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66
Query: 185 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE 33
A F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I LE Y+
Sbjct: 67 AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117
>BC132795-1|AAI32796.1| 125|Homo sapiens biogenesis of
lysosome-related organelles complex-1, subunit 1
protein.
Length = 125
Score = 151 bits (366), Expect = 2e-36
Identities = 72/111 (64%), Positives = 87/111 (78%)
Frame = -2
Query: 365 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 186
KEHQAKQ ++ +QE++R+E ITAA LT+ALVDHLNVGVAQAY+NQ+KLD E K L
Sbjct: 7 KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66
Query: 185 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE 33
A F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I LE Y+
Sbjct: 67 AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117
>BC130640-1|AAI30641.1| 125|Homo sapiens biogenesis of
lysosome-related organelles complex-1, subunit 1
protein.
Length = 125
Score = 151 bits (366), Expect = 2e-36
Identities = 72/111 (64%), Positives = 87/111 (78%)
Frame = -2
Query: 365 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 186
KEHQAKQ ++ +QE++R+E ITAA LT+ALVDHLNVGVAQAY+NQ+KLD E K L
Sbjct: 7 KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66
Query: 185 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE 33
A F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I LE Y+
Sbjct: 67 AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 30.7 bits (66), Expect = 5.3
Identities = 24/78 (30%), Positives = 44/78 (56%)
Frame = -2
Query: 248 VAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDM 69
+AQA ++KK A+A+L + Q++ L +N LK+ ++++ S+++ M
Sbjct: 2063 LAQAVEHRKK--AQAELASFKVLLDDTQSEAARVLADNLK--LKK--ELQSNKESVKSQM 2116
Query: 68 KIITDTLERAYEKAQEKH 15
K + LER E+A+EKH
Sbjct: 2117 KQKDEDLERRLEQAEEKH 2134
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
Length = 3225
Score = 30.7 bits (66), Expect = 5.3
Identities = 24/78 (30%), Positives = 44/78 (56%)
Frame = -2
Query: 248 VAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDM 69
+AQA ++KK A+A+L + Q++ L +N LK+ ++++ S+++ M
Sbjct: 2029 LAQAVEHRKK--AQAELASFKVLLDDTQSEAARVLADNLK--LKK--ELQSNKESVKSQM 2082
Query: 68 KIITDTLERAYEKAQEKH 15
K + LER E+A+EKH
Sbjct: 2083 KQKDEDLERRLEQAEEKH 2100
>BC057227-1|AAH57227.1| 318|Homo sapiens Unknown (protein for
IMAGE:4702419) protein.
Length = 318
Score = 30.7 bits (66), Expect = 5.3
Identities = 24/78 (30%), Positives = 44/78 (56%)
Frame = -2
Query: 248 VAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDM 69
+AQA ++KK A+A+L + Q++ L +N LK+ ++++ S+++ M
Sbjct: 148 LAQAVEHRKK--AQAELASFKVLLDDTQSEAARVLADNLK--LKK--ELQSNKESVKSQM 201
Query: 68 KIITDTLERAYEKAQEKH 15
K + LER E+A+EKH
Sbjct: 202 KQKDEDLERRLEQAEEKH 219
>BC045172-1|AAH45172.2| 749|Homo sapiens LAMB4 protein protein.
Length = 749
Score = 30.3 bits (65), Expect = 7.0
Identities = 24/116 (20%), Positives = 50/116 (43%)
Frame = -2
Query: 356 QAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAIN 177
Q + K V + Q K+ I A + L++ L Q+++D ++ +L+ +
Sbjct: 283 QLNEQLKAVYEFQDLKDTIERAKNEADLLLEDL----------QEEIDLQSSVLNASIAD 332
Query: 176 FSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYEKAQEKHKQ 9
S+ +++ + + + E N + + ND+ I DTL + E+ KQ
Sbjct: 333 SSENIKKYYHISSSAEKKINETSSTINTSANTRNDLLTILDTLTSKGNLSLERLKQ 388
>AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain
precursor protein.
Length = 1761
Score = 30.3 bits (65), Expect = 7.0
Identities = 24/116 (20%), Positives = 50/116 (43%)
Frame = -2
Query: 356 QAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAIN 177
Q + K V + Q K+ I A + L++ L Q+++D ++ +L+ +
Sbjct: 1257 QLNEQLKAVYEFQDLKDTIERAKNEADLLLEDL----------QEEIDLQSSVLNASIAD 1306
Query: 176 FSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYEKAQEKHKQ 9
S+ +++ + + + E N + + ND+ I DTL + E+ KQ
Sbjct: 1307 SSENIKKYYHISSSAEKKINETSSTINTSANTRNDLLTILDTLTSKGNLSLERLKQ 1362
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,492,483
Number of Sequences: 237096
Number of extensions: 1452847
Number of successful extensions: 4515
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4515
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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