Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_G10
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30423-8|CAA83011.1| 129|Caenorhabditis elegans Hypothetical pr... 138 3e-33
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 34 0.086
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 34 0.086
U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone deace... 30 1.9
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 29 4.3
L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeo... 28 7.5
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ... 28 7.5
Z48795-6|CAA88730.1| 203|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z30423-8|CAA83011.1| 129|Caenorhabditis elegans Hypothetical
protein T20G5.10 protein.
Length = 129
Score = 138 bits (335), Expect = 3e-33
Identities = 66/111 (59%), Positives = 81/111 (72%)
Frame = -2
Query: 365 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 186
KEH KQ +R VQE+ + E I AA L+ A+VDHLN VAQAY NQK+LD EAK
Sbjct: 3 KEHSKKQHLRREVQEKLKNEAIVAAQTLSTAVVDHLNAKVAQAYGNQKRLDVEAKRFENN 62
Query: 185 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE 33
+ +KQT+QWL + E + ALKEIGDVENW+++IENDMKIIT+TL RAYE
Sbjct: 63 SAALAKQTEQWLFITEGLNYALKEIGDVENWSKTIENDMKIITETLRRAYE 113
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 34.3 bits (75), Expect = 0.086
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = -2
Query: 233 LNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITD 54
LN+ E K+ H I +K QQ L EN + GD+E R +E D+K+ +
Sbjct: 1019 LNEDLQSEEDKVNHLEKIR-NKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQE 1077
Query: 53 TLERAYEKAQEKH 15
++ E ++KH
Sbjct: 1078 NID---EITKQKH 1087
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 34.3 bits (75), Expect = 0.086
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = -2
Query: 233 LNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITD 54
LN+ E K+ H I +K QQ L EN + GD+E R +E D+K+ +
Sbjct: 1019 LNEDLQSEEDKVNHLEKIR-NKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQE 1077
Query: 53 TLERAYEKAQEKH 15
++ E ++KH
Sbjct: 1078 NID---EITKQKH 1087
>U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical
protein C18H2.5 protein.
Length = 1139
Score = 31.9 bits (69), Expect = 0.46
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -2
Query: 299 TAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENF--SS 126
TA + L +++LN Q +N+KK D + +LLH+ + S T +++T V SS
Sbjct: 455 TALDSLNNLNLENLN---PQETINEKKYDTDYQLLHKSSKIHS--TVEFITSVRRIGNSS 509
Query: 125 ALKEIGDVENWARSIENDMKIITDTLERAYEKAQEKHKQ 9
K+I D A I +DM+ +E+ E+ + + KQ
Sbjct: 510 DHKKIKD----AVKIYSDMRTDYVAVEKFLEETRRQSKQ 544
>Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical
protein F13A7.7 protein.
Length = 358
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 395 CLIIKQYEFKKDNYICTYHTI 457
CLI K+YE + DN+ C Y I
Sbjct: 163 CLIDKEYELQSDNFSCGYRVI 183
>AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone
deacetylase protein 4 protein.
Length = 755
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 510 NETFSVDFLKDPEKLRLWGLFYFPPFVHFCAQILI 614
N FS D ++DPE L W P FC +I
Sbjct: 584 NVPFSGDVMRDPEYLAAWRTVIEPVMASFCPDFII 618
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
protein C01B9.1b protein.
Length = 1671
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 164 FVWKNLLHLGVKVLLPH-LTFSDLNRLEQHRHLNDLPML 277
F ++ HLG+ ++ H ++F DL L++H +D+P +
Sbjct: 520 FARRDFGHLGIAKIIAHPISFEDLTFLKEHFITSDIPQM 558
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
protein C01B9.1a protein.
Length = 1601
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 164 FVWKNLLHLGVKVLLPH-LTFSDLNRLEQHRHLNDLPML 277
F ++ HLG+ ++ H ++F DL L++H +D+P +
Sbjct: 450 FARRDFGHLGIAKIIAHPISFEDLTFLKEHFITSDIPQM 488
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 227 QKKLDAEAKLLHQGAINFS-KQTQQWLTLVENFSSALKEIGDV 102
++ L+ E G +N+ K+ Q L VE + ALK +GDV
Sbjct: 887 EEALETEKDFSRYGRVNYVLKERLQLLNCVEKLAKALKIVGDV 929
>L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeobox
protein 26 protein.
Length = 586
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 239 AYLNQ-KKLDAEAKLLHQGAINFSKQTQQWL-TLVENFSSALKEIGDVENWA 90
A+L+Q +K A A++LH G IN + LV NF L+++ + +WA
Sbjct: 233 AFLDQQRKQVAAAQILHNGKINIERLVSSVKGDLVTNFMKDLEKV--IRDWA 282
>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
protein Y48G1C.5 protein.
Length = 1161
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -2
Query: 191 QGAINFSKQTQQWLTLVENFSSALKEIGDVENW--ARSIENDMKIITDT 51
Q I + Q+ T V++ +IGD++ W + + DMK ITD+
Sbjct: 114 QSNIGDDVEADQFFTTVKSVVHVAHDIGDLKKWPDETNFKADMKDITDS 162
>Z48795-6|CAA88730.1| 203|Caenorhabditis elegans Hypothetical
protein R05H5.7 protein.
Length = 203
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -1
Query: 192 PRCNKFFQTNTAMVDSCGKFQQCSQRNWGCRKLG 91
PR N F TN+ ++ + F +C + C++ G
Sbjct: 78 PRFNSFVNTNSIIISNENGFGECRPHHTNCQQSG 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,488,783
Number of Sequences: 27780
Number of extensions: 274811
Number of successful extensions: 860
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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