Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_G04
(668 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 50 3e-07
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 31 0.11
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.20
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom... 29 0.46
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 28 1.4
SPAC18G6.04c |shm2||serine hydroxymethyltransferase Shm2 |Schizo... 27 3.2
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 26 5.6
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 26 5.6
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 25 7.5
SPAC27F1.08 |pdt1||Nramp family manganese ion transporter|Schizo... 25 7.5
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 25 9.9
SPBC32F12.01c ||SPBC685.10c|inositol phosphosphingolipid phospho... 25 9.9
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 25 9.9
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 9.9
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 9.9
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 50.0 bits (114), Expect = 3e-07
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Frame = -1
Query: 488 QVYIHTLVVALSCVPTALWVGLTINI-VGKKLMLVIMLISSGLAALGLNLVRSSLENLIL 312
+ Y ++L+V+ VP +L G+ + +G+K L + LI +G+ ++S L
Sbjct: 407 KTYRNSLIVSAIGVPGSLIAGVLVEFRIGRKGTLCLSLILTGVFLFASTTAKTSNAYLGW 466
Query: 311 SCVFEAIVSCTEAVLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEHCIV 132
+C F VL+ E+FP+K R+ I V+ +
Sbjct: 467 NCTFSFFSDIMYGVLYAYTPEVFPSKVRGTAVGLAASANRILGIFSPVI-AMRANLTTSA 525
Query: 131 PIYMFGTLLITSGLLCIILPKSTR 60
PI++ G L I +G+L + P R
Sbjct: 526 PIFVSGALFIFAGILVVFFPYEPR 549
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 266 FCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEHCIVPI-YMFGTLLITSGL 90
F + E+FP++ CG+ GAI+ ++F L + + ++F ++ +
Sbjct: 479 FVIPAEVFPSRVRAFSHGICAACGKAGAILSALLFNKLTEVIGFGNVLWIFFGCMVAGAV 538
Query: 89 LCIILPKS 66
+ +ILP++
Sbjct: 539 VTLILPET 546
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 30.7 bits (66), Expect = 0.20
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Frame = +1
Query: 250 SQMTQKSTASVQLTMASNTHDRIRFSSDDRTRLSPKAASPELISIITNMSFLPTMLIVRP 429
S T S++S T +S++H SS + ++ ++S S +++ S +P+
Sbjct: 102 SSATLTSSSSASPTSSSSSH---ALSSSSSSLVASSSSSGMSSSSLSHSSSVPSSSSSYH 158
Query: 430 TQSAVGTQLSATTSVWMYTWSCTGDIVLWIGMSVVALATA--------------SETSQT 567
+ S + LS++ S+ T+ I+ + S V+ S TS T
Sbjct: 159 SSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPTTTNNWNSSSSFTSSTSST 218
Query: 568 PAGSSPYSDANWLNRSKRSGNHI 636
P SS S ++S +S NH+
Sbjct: 219 PISSSYSSSGTLPSKSNKSSNHV 241
>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 29.5 bits (63), Expect = 0.46
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -1
Query: 404 KKLMLVIMLISSGLAALGLNLVRSSLENLILSCVFEAIVSCTEAVLFCVICEIF 243
K + L ++LIS + + + R L N + + F + C + V FC++ +F
Sbjct: 38 KYIELDVVLISMDVILMKPQVYRHLLFNSLSARTFRNLTKCAKVVNFCILISLF 91
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 468 GGGAELRPHRALGRPHNQHRRQE 400
GGG +R H+ GRP N RRQ+
Sbjct: 233 GGGPGIRVHQFGGRPRNFARRQQ 255
>SPAC18G6.04c |shm2||serine hydroxymethyltransferase Shm2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 472
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 483 VHPHAGGGAELRPHRALGRPHNQ 415
V PH+G A L+ ++A+ +PH++
Sbjct: 107 VQPHSGSPANLQAYQAVMKPHDR 129
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 629 FPDLFERFSQFASLYGD 579
FP +FE + QF YGD
Sbjct: 1017 FPGVFEEYRQFVDRYGD 1033
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 467 PACGCTPGRAPATSCSGLVCR 529
P C C P C G VCR
Sbjct: 20 PGCNCLPDWPVTLPCGGTVCR 40
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 418 IVRPTQSAVGTQLSATTSVWMYTWSCTGDIVL 513
++ P +S+ + A W+ T SCT D +L
Sbjct: 78 VIPPGESSKCRAMKAEIEDWLLTQSCTRDTIL 109
>SPAC27F1.08 |pdt1||Nramp family manganese ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 521
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/58 (20%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 364 SPELISIITNMSFLPTMLIVRPTQS-AVG-TQLSATTSVWMYTWSCTGDIVLWIGMSV 531
S +++ ++++ + T ++R T ++G T T ++W++ + +++W+GM V
Sbjct: 462 SRKVMRVVSDSTNEETGQLIRETHDYSLGWTMTIVTWAIWLFLTALNLLLIVWLGMGV 519
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -1
Query: 191 VGAIVGNVVFGALVDEHCIVPIYMFGTLLITSG 93
+GA++G ++ GAL D P+ +++I G
Sbjct: 138 LGALLGGIIAGALADFFGRKPVIAIASIIIIVG 170
>SPBC32F12.01c ||SPBC685.10c|inositol phosphosphingolipid
phospholipase C |Schizosaccharomyces pombe|chr
2|||Manual
Length = 424
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 516 DWYVGRGIGDGQRNLADSGGLVSVQRRELAEPLEK 620
DWYVG+G+ SG ++S+ L P K
Sbjct: 111 DWYVGKGVATASLQ-HPSGRIISLFNTHLHAPYGK 144
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 535 ALATASETSQTPAGSSPYSDANWLNRSKRSGNHI 636
ALA T Q+ SSPYS + +N +K+ H+
Sbjct: 564 ALANQLLTPQSNLISSPYSYSRLINTNKKVYRHV 597
>SPAC23D3.13c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1616
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 373 LISIITNMSFLPTMLIVRPTQSAVGTQLSATTSVWMYTWSCTGDI 507
L+++IT+ S P + P QS LSA T +Y S I
Sbjct: 717 LLAVITSSSVHPIQTLTAPRQSFNEDLLSANTKNSVYKTSANRSI 761
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.0 bits (52), Expect = 9.9
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = +1
Query: 349 SPKAASPELISIITNMSFLPTMLIVRPTQSAVGTQLSATTSVWMYTWSCTGDIVLWIGMS 528
+P +S IS T ++ P T ++V + TS + T +CT + +
Sbjct: 507 TPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTST 566
Query: 529 VVALATASETSQTPAGSSPYSDAN 600
V + + +S TP S+P + N
Sbjct: 567 PVTSSNYTISSSTPVTSTPVTTTN 590
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,164,913
Number of Sequences: 5004
Number of extensions: 37597
Number of successful extensions: 143
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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