Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_G04
(668 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 27 0.71
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 26 0.93
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 25 2.9
DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein. 25 2.9
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 25 2.9
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 24 5.0
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 5.0
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 5.0
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 24 5.0
Y13592-1|CAA73920.1| 136|Anopheles gambiae voltage-gated sodium... 23 8.7
AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative transcri... 23 8.7
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 26.6 bits (56), Expect = 0.71
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 249 LADDAEEHGLRAAHDGLEHARQDQVLERRPHQVKSQGRQ 365
+A D++ ++A H G++H D++L+R + GR+
Sbjct: 2509 MAHDSDGAVIQAEHKGIKHMAYDKLLQRVSEIEMTDGRK 2547
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 26.2 bits (55), Expect = 0.93
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 249 LADDAEEHGLRAAHDGLEHARQDQVLERRPHQVKSQGRQ 365
+A D + ++A H G++H D++L+R + GR+
Sbjct: 2519 MAHDGDGAVIQAQHKGIKHMAYDKLLQRVSEIEMTDGRK 2557
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 24.6 bits (51), Expect = 2.9
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +3
Query: 258 DAEEHGLRAAHDGL--EHARQDQVLERRPHQVKSQGRQPGTYQHNH*H 395
DA G R G + R VL + HQ + Q +Q + H+H H
Sbjct: 120 DATSSGGRPGQSGSPPDPTRNGIVLHHQAHQQQQQQQQQLHHHHHHHH 167
>DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein.
Length = 383
Score = 24.6 bits (51), Expect = 2.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 376 ISIITNMSFLPTMLIVRPTQSAVGTQLSATTSVWMYTWSCTGDIVLWI 519
I +T S +L PTQ+ + L S+W W T ++L++
Sbjct: 233 IIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRWLRTISVILFL 280
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 24.6 bits (51), Expect = 2.9
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -1
Query: 458 LSCVPTALW--VGLTINIV-GKKLMLVIMLISSGLAALGLNLVRSSLENLILSCVFEAIV 288
L +P W + IV KK ++IML +G N++ +L++ S F A++
Sbjct: 1602 LKAIPRPRWRPQAIVFEIVTNKKFDMIIMLF------IGFNMLTMTLDHYKQSETFSAVL 1655
Query: 287 SCTEAVLFCV 258
+ C+
Sbjct: 1656 DYLNMIFICI 1665
Score = 23.0 bits (47), Expect = 8.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 470 LVVALSCVPTALWVGLTINIVGKKLMLVIMLISSGLAAL 354
LV +SC+P L + N+V L L ++L + G ++L
Sbjct: 1000 LVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSL 1038
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.8 bits (49), Expect = 5.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 555 NLADSGGLVSVQRRELAEPLEKVREPHH*SVXTEH 659
NLAD+ L +V++ E P + + H TEH
Sbjct: 717 NLADADSLTTVEKEEGDNPDGEEEKLSHEPTPTEH 751
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.8 bits (49), Expect = 5.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 258 DAEEHGLRAAHDGLEHARQDQVLERRPHQVKSQGR 362
D E + +RA H G+E D + R + S GR
Sbjct: 2468 DEEGNVVRATHKGIERIIYDPLFNRPSKIMLSDGR 2502
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.8 bits (49), Expect = 5.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 258 DAEEHGLRAAHDGLEHARQDQVLERRPHQVKSQGR 362
D E + +RA H G+E D + R + S GR
Sbjct: 2469 DEEGNVVRATHKGIERIVYDPLFNRPSKIMLSDGR 2503
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 23.8 bits (49), Expect = 5.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +2
Query: 407 RRC*L*GRPKARWGRSSAPPPACGCTPGRAPATSCSGLVC 526
R C L G K + + PP C P + A SG C
Sbjct: 450 RDCCLRGGEKGHFAATCRLPPRCVLCPDGSNAHHSSGAFC 489
>Y13592-1|CAA73920.1| 136|Anopheles gambiae voltage-gated sodium
channel protein.
Length = 136
Score = 23.0 bits (47), Expect = 8.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 470 LVVALSCVPTALWVGLTINIVGKKLMLVIMLISSGLAAL 354
LV +SC+P L + N+V L L ++L + G ++L
Sbjct: 85 LVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSL 123
>AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative
transcription factor protein.
Length = 319
Score = 23.0 bits (47), Expect = 8.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 136 MQCSSTSAPNTTLPTMA 186
M CSS + TTLPT A
Sbjct: 33 MGCSSAGSTGTTLPTDA 49
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,741
Number of Sequences: 2352
Number of extensions: 10968
Number of successful extensions: 36
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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