Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_G04
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23453-3|AAC46757.6| 297|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 39 0.004
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 39 0.004
Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical pr... 37 0.011
U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical pr... 34 0.079
U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical pr... 34 0.079
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 33 0.18
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 31 0.74
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 2.3
Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic catio... 29 3.0
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 29 3.9
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 29 3.9
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 28 5.2
AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical ... 28 5.2
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 28 6.9
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 27 9.1
U88309-1|AAB42331.3| 395|Caenorhabditis elegans Hypothetical pr... 27 9.1
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 27 9.1
AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical... 27 9.1
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 27 9.1
>U23453-3|AAC46757.6| 297|Caenorhabditis elegans Hypothetical
protein B0252.3a protein.
Length = 297
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/146 (21%), Positives = 70/146 (47%)
Frame = -1
Query: 485 VYIHTLVVALSCVPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNLVRSSLENLILSC 306
+Y++ ++++L P ++ + +N G+K+++ I +GL+ LG+ ++ S ++
Sbjct: 132 LYLNFVLMSLVEAPAYIFSPIFMNKYGRKVLISGTHIIAGLSFLGI-VLSSEAWHIHFWL 190
Query: 305 VFEAIVSCTEAVLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEHCIVPI 126
+ + +SC+ ++ EIFPT R G ++ + L H + P
Sbjct: 191 LGKFAISCSFMSIYMFASEIFPTDGRNKCIGFCETLSRFGGMLSPYL-SHLTAVHALAPA 249
Query: 125 YMFGTLLITSGLLCIILPKSTRPERP 48
+ ++ GLL +ILP++ + P
Sbjct: 250 ITLSLIAVSGGLLTLILPETLNTKLP 275
>U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical
protein B0252.3c protein.
Length = 464
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/146 (21%), Positives = 70/146 (47%)
Frame = -1
Query: 485 VYIHTLVVALSCVPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNLVRSSLENLILSC 306
+Y++ ++++L P ++ + +N G+K+++ I +GL+ LG+ ++ S ++
Sbjct: 299 LYLNFVLMSLVEAPAYIFSPIFMNKYGRKVLISGTHIIAGLSFLGI-VLSSEAWHIHFWL 357
Query: 305 VFEAIVSCTEAVLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEHCIVPI 126
+ + +SC+ ++ EIFPT R G ++ + L H + P
Sbjct: 358 LGKFAISCSFMSIYMFASEIFPTDGRNKCIGFCETLSRFGGMLSPYL-SHLTAVHALAPA 416
Query: 125 YMFGTLLITSGLLCIILPKSTRPERP 48
+ ++ GLL +ILP++ + P
Sbjct: 417 ITLSLIAVSGGLLTLILPETLNTKLP 442
>U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical
protein B0252.3b protein.
Length = 484
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/146 (21%), Positives = 70/146 (47%)
Frame = -1
Query: 485 VYIHTLVVALSCVPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNLVRSSLENLILSC 306
+Y++ ++++L P ++ + +N G+K+++ I +GL+ LG+ ++ S ++
Sbjct: 319 LYLNFVLMSLVEAPAYIFSPIFMNKYGRKVLISGTHIIAGLSFLGI-VLSSEAWHIHFWL 377
Query: 305 VFEAIVSCTEAVLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEHCIVPI 126
+ + +SC+ ++ EIFPT R G ++ + L H + P
Sbjct: 378 LGKFAISCSFMSIYMFASEIFPTDGRNKCIGFCETLSRFGGMLSPYL-SHLTAVHALAPA 436
Query: 125 YMFGTLLITSGLLCIILPKSTRPERP 48
+ ++ GLL +ILP++ + P
Sbjct: 437 ITLSLIAVSGGLLTLILPETLNTKLP 462
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Frame = -1
Query: 449 VPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNLVRSSLEN---LILSCVFEAIVSCT 279
+P + V L I+ +G+++M + ++G+ L L + + +I+ V + VS
Sbjct: 389 LPAVIIVALLIDRLGRRIMYSGAIFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVSVA 448
Query: 278 EAVLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEH-CIVPIYMFGTLLI 102
V++ E+FPT R GAI + + LVD IV I F L +
Sbjct: 449 YTVMYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRFGRIVMIIPFTILAL 508
Query: 101 TSGLLC-IILPKSTRPERP 48
+ ++ +LP++ + P
Sbjct: 509 CASIVSWTMLPETVNQQLP 527
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Frame = -1
Query: 449 VPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNLVRSSLEN---LILSCVFEAIVSCT 279
+P + V L I+ +G+++M + ++G+ L L + + +I+ V + VS
Sbjct: 355 LPAVIIVALLIDRLGRRIMYSGAIFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVSVA 414
Query: 278 EAVLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEH-CIVPIYMFGTLLI 102
V++ E+FPT R GAI + + LVD IV I F L +
Sbjct: 415 YTVMYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRFGRIVMIIPFTILAL 474
Query: 101 TSGLLC-IILPKSTRPERP 48
+ ++ +LP++ + P
Sbjct: 475 CASIVSWTMLPETVNQQLP 493
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Frame = -1
Query: 449 VPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNLVRSSLEN---LILSCVFEAIVSCT 279
+P + V L I+ +G+++M + ++G+ L L + + +I+ V + VS
Sbjct: 389 LPAVIIVALLIDRLGRRIMYSGAIFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVSVA 448
Query: 278 EAVLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEH-CIVPIYMFGTLLI 102
V++ E+FPT R GAI + + LVD IV I F L +
Sbjct: 449 YTVMYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRFGRIVMIIPFTILAL 508
Query: 101 TSGLLC-IILPKSTRPERP 48
+ ++ +LP++ + P
Sbjct: 509 CASIVSWTMLPETVNQQLP 527
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Frame = -1
Query: 449 VPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNLVRSSLEN---LILSCVFEAIVSCT 279
+P + V L I+ +G+++M + ++G+ L L + + +I+ V + VS
Sbjct: 355 LPAVIIVALLIDRLGRRIMYSGAIFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVSVA 414
Query: 278 EAVLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEH-CIVPIYMFGTLLI 102
V++ E+FPT R GAI + + LVD IV I F L +
Sbjct: 415 YTVMYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRFGRIVMIIPFTILAL 474
Query: 101 TSGLLC-IILPKSTRPERP 48
+ ++ +LP++ + P
Sbjct: 475 CASIVSWTMLPETVNQQLP 493
>Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical
protein M03B6.2 protein.
Length = 596
Score = 37.1 bits (82), Expect = 0.011
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = -1
Query: 380 LISSGLAALGLNLVRSSLENLILSCVFEAIVSCTEAVLFCVICEIFPTKXXXXXXXXXXM 201
LI++GLA + + L + + L F V+C A+ ++ E+ +
Sbjct: 460 LIAAGLATMTVPLYTAYWQFLAFCVPFSIGVACFAALRSIIVVELIGLEKLSNAFGILLT 519
Query: 200 CGRVGAIVGNVVFGALVD--EHCIVPIYMFGTLLITSGLLCIIL 75
VGA+VG+ + A+ D + Y+ G L+ SG +CI L
Sbjct: 520 FMGVGAVVGSPLAAAMKDYTGNFDTSFYVMGALMTISGAMCIPL 563
>U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical
protein K05F1.6b protein.
Length = 627
Score = 34.3 bits (75), Expect = 0.079
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Frame = -1
Query: 449 VPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNL-VRSSLENLILSCVFEAIVSCTEA 273
+PT L+ + + +G+K L++ LI+SGL + L + S L L+ ++ ++ A
Sbjct: 388 IPT-LFACVWMMQLGRKKALMLTLITSGLFIIVAMLSMVSGHYMLALAFMYFGKIAVQGA 446
Query: 272 --VLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEHCIVPIYMFGTLLIT 99
+L+ E++PT M R G+ + + + IVP+ +F +
Sbjct: 447 FNILYIFTSELYPTVVRNTAVGVTSMVARFGSGLSSYIALLSNISLPIVPMIIFAVFSLF 506
Query: 98 SGLLCIILPKSTRPERPQ 45
+G+L +LP+++ P+
Sbjct: 507 AGMLVFVLPETSEKPLPE 524
>U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical
protein K05F1.6a protein.
Length = 773
Score = 34.3 bits (75), Expect = 0.079
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Frame = -1
Query: 449 VPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNL-VRSSLENLILSCVFEAIVSCTEA 273
+PT L+ + + +G+K L++ LI+SGL + L + S L L+ ++ ++ A
Sbjct: 534 IPT-LFACVWMMQLGRKKALMLTLITSGLFIIVAMLSMVSGHYMLALAFMYFGKIAVQGA 592
Query: 272 --VLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEHCIVPIYMFGTLLIT 99
+L+ E++PT M R G+ + + + IVP+ +F +
Sbjct: 593 FNILYIFTSELYPTVVRNTAVGVTSMVARFGSGLSSYIALLSNISLPIVPMIIFAVFSLF 652
Query: 98 SGLLCIILPKSTRPERPQ 45
+G+L +LP+++ P+
Sbjct: 653 AGMLVFVLPETSEKPLPE 670
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 33.1 bits (72), Expect = 0.18
Identities = 30/147 (20%), Positives = 52/147 (35%)
Frame = -1
Query: 500 PVHDQVYIHTLVVALSCVPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNLVRSSLEN 321
P+ Y L L+ P + L I G+K + + + L
Sbjct: 366 PLTRSDYFDLLSTTLAEFPGLIITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTV 425
Query: 320 LILSCVFEAIVSCTEAVLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEH 141
+L V A +S + E++PT R+GAIV + ++
Sbjct: 426 TVLIFVARAFISGAFQCAYVYTPEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKS 485
Query: 140 CIVPIYMFGTLLITSGLLCIILPKSTR 60
+PI ++GT I + + LP T+
Sbjct: 486 LSLPIGIYGTAAILGLIASLSLPIETK 512
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 33.1 bits (72), Expect = 0.18
Identities = 30/147 (20%), Positives = 52/147 (35%)
Frame = -1
Query: 500 PVHDQVYIHTLVVALSCVPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNLVRSSLEN 321
P+ Y L L+ P + L I G+K + + + L
Sbjct: 366 PLTRSDYFDLLSTTLAEFPGLIITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTV 425
Query: 320 LILSCVFEAIVSCTEAVLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEH 141
+L V A +S + E++PT R+GAIV + ++
Sbjct: 426 TVLIFVARAFISGAFQCAYVYTPEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKS 485
Query: 140 CIVPIYMFGTLLITSGLLCIILPKSTR 60
+PI ++GT I + + LP T+
Sbjct: 486 LSLPIGIYGTAAILGLIASLSLPIETK 512
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 31.1 bits (67), Expect = 0.74
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 1/123 (0%)
Frame = -1
Query: 449 VPTALWVGLTINIVGKKLMLVIMLISSGLAALGLNLVRSSLE-NLILSCVFEAIVSCTEA 273
+P L++ + + ++ + + +A L + + + +LI+ V + SC
Sbjct: 381 LPAYLFIPICLTRTKRRPTRFLCHFTGSMALLTMYFLSNDTSLHLIIWLVAKFCASCCYI 440
Query: 272 VLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEHCIVPIYMFGTLLITSG 93
F E+FPT C +GAIV +F L+D P F +L G
Sbjct: 441 FCFIYAAELFPTWCRSCCIGVCSTCCNIGAIVAPHIF--LIDS--AAPGAQF-LVLAAVG 495
Query: 92 LLC 84
LLC
Sbjct: 496 LLC 498
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 446 GRSSAPPPACGCTPGRAP 499
G + PPPACGC G AP
Sbjct: 28 GCAPPPPPACGCGGGAAP 45
>Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical
protein ZK455.8b protein.
Length = 414
Score = 29.1 bits (62), Expect = 3.0
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Frame = -1
Query: 410 VGKKLMLVIMLISSGLAALGLNLV---RSSLENLILSCVFEAIVSCTEAVLFCVICEIFP 240
+G+K +++L SGL L ++ + S LI + +A + + +L+ E+ P
Sbjct: 281 MGRKRSQMLVLFGSGLFLLTSVVMVYRKQSTLALIFMLLSKACIQGSFNILYIFTSELNP 340
Query: 239 TKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEHC-IVPIYMFGTLLITSGLLCIILPKS 66
T M R+GA + L D +VP+ +F + +G L ++LP++
Sbjct: 341 TVVRNSAVGISSMVARMGAGASGYI-AILSDVTMPLVPMTIFACFSLLAGCLVLLLPET 398
>Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical
protein ZK455.8a protein.
Length = 757
Score = 29.1 bits (62), Expect = 3.0
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Frame = -1
Query: 410 VGKKLMLVIMLISSGLAALGLNLV---RSSLENLILSCVFEAIVSCTEAVLFCVICEIFP 240
+G+K +++L SGL L ++ + S LI + +A + + +L+ E+ P
Sbjct: 569 MGRKRSQMLVLFGSGLFLLTSVVMVYRKQSTLALIFMLLSKACIQGSFNILYIFTSELNP 628
Query: 239 TKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEHC-IVPIYMFGTLLITSGLLCIILPKS 66
T M R+GA + L D +VP+ +F + +G L ++LP++
Sbjct: 629 TVVRNSAVGISSMVARMGAGASGYI-AILSDVTMPLVPMTIFACFSLLAGCLVLLLPET 686
>AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic cation
transporter protein.
Length = 414
Score = 29.1 bits (62), Expect = 3.0
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Frame = -1
Query: 410 VGKKLMLVIMLISSGLAALGLNLV---RSSLENLILSCVFEAIVSCTEAVLFCVICEIFP 240
+G+K +++L SGL L ++ + S LI + +A + + +L+ E+ P
Sbjct: 281 MGRKRSQMLVLFGSGLFLLTSVVMVYRKQSTLALIFMLLSKACIQGSFNILYIFTSELNP 340
Query: 239 TKXXXXXXXXXXMCGRVGAIVGNVVFGALVDEHC-IVPIYMFGTLLITSGLLCIILPKS 66
T M R+GA + L D +VP+ +F + +G L ++LP++
Sbjct: 341 TVVRNSAVGISSMVARMGAGASGYI-AILSDVTMPLVPMTIFACFSLLAGCLVLLLPET 398
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -3
Query: 534 HDRHTNPEHDVAGAR---PGVHPH-AGGGAELRPHRALGRPHNQHRRQETHVSDYADKFR 367
H H H+ G R P + P+ +GGG H + HN ++ Q++ + DK
Sbjct: 23 HPPHPTSHHNSRGGRGGRPSMKPYTSGGGRGGGHHHSQHHHHNHNQLQKSATIGHIDKVP 82
Query: 366 AGGLG 352
G G
Sbjct: 83 RGDHG 87
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -3
Query: 534 HDRHTNPEHDVAGAR---PGVHPH-AGGGAELRPHRALGRPHNQHRRQETHVSDYADKFR 367
H H H+ G R P + P+ +GGG H + HN ++ Q++ + DK
Sbjct: 527 HPPHPTSHHNSRGGRGGRPSMKPYTSGGGRGGGHHHSQHHHHNHNQLQKSATIGHIDKVP 586
Query: 366 AGGLG 352
G G
Sbjct: 587 RGDHG 591
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 284 CTEAVLFCVICEIFPTKXXXXXXXXXXMCGRVGAIVGNVVF 162
C L + E+FPT +CGR+G + G +VF
Sbjct: 427 CLFLQLLLITAEMFPTGIRNIASAHINVCGRLGNVFGPMVF 467
>AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical
protein F49F1.1 protein.
Length = 265
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 623 DLFERFSQFASLYGDEPAGVCEVSLAVANATTDIPIQSTMSPV 495
D+++ S F + D+ +C + + N+TT I +T++PV
Sbjct: 91 DIWDGCSHFLAPCSDDIKSLCPIKCGLCNSTTTPMILTTITPV 133
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 191 VGAIVGNVVFGALVDEHCIVPIYMFGTLL 105
+G +VGN++ G L D P+Y+F LL
Sbjct: 115 LGTLVGNLILGYLSDTIGRRPVYIFSILL 143
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +1
Query: 130 GTMQCSSTSAPNTTLPTMAPTLPHXXXXXXXXXXXLVGKISQMTQ--KSTASVQLTMASN 303
G++ +S++ PN T T APT S T KST +TM S
Sbjct: 373 GSLLNASSARPNVTSTTTAPTTESSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPST 432
Query: 304 THDRIRFSSDDRTRLSPKAASPELISIITNMS 399
T ++ F+S + S S + T S
Sbjct: 433 T-EKTTFTSTSSSTTSSPVCSKRTVGFFTGNS 463
>U88309-1|AAB42331.3| 395|Caenorhabditis elegans Hypothetical
protein T23B3.4 protein.
Length = 395
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 512 STMSPVHDQVYIHTLVVALSCVPTALWVGLTINIV 408
ST P+ D +Y L L VP AL VGL N++
Sbjct: 138 STKGPLVDFIYQLYLTFTLLFVPLALMVGLYGNVI 172
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 508 VLWIGMSVVALATASETSQTPAGSSPYSDANWLN 609
++W +V AL S +TPAG A W N
Sbjct: 1126 IVWDDAAVDALLDRSNKEETPAGEDGEEKAEWQN 1159
>AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical
protein Y73F8A.1 protein.
Length = 716
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = -1
Query: 443 TALWVGLTINIVGKKLMLVIMLISSGLAALGLNLVRSSLENLILSCVFEAIVSCTEAVLF 264
T W + + ++G + +I+ ++ G+N V S +EN + + F+ + S + L
Sbjct: 354 TQFWNLVDVVLLGFSVATIILSVNR--TKTGVNRVNSVIENGLTNAPFDDVTSSENSYLN 411
Query: 263 CVICEIF 243
C +F
Sbjct: 412 IKACVVF 418
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 508 VLWIGMSVVALATASETSQTPAGSSPYSDANWLN 609
++W +V AL S +TPAG A W N
Sbjct: 1126 IVWDDAAVDALLDRSNKEETPAGEDGEEKAEWQN 1159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,656,020
Number of Sequences: 27780
Number of extensions: 243263
Number of successful extensions: 1040
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -