Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_G02
         (625 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6EB13 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_Q7QWI0 Cluster: GLP_538_26473_24605; n=1; Giardia lambl...    32   9.7  

>UniRef50_A6EB13 Cluster: Putative uncharacterized protein; n=1;
           Pedobacter sp. BAL39|Rep: Putative uncharacterized
           protein - Pedobacter sp. BAL39
          Length = 292

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -3

Query: 554 VNQRSELFVDLEYKSII*VKHFSDLPTMTQKFRIIRVMFNFNSDPIKSNIH 402
           VNQ   +    +Y +   + HF D P    K RI+ + + F  DP K  I+
Sbjct: 213 VNQHFPVQESFDYGNADRIVHFKDTPPAVMKNRILNMNWKFEFDPTKQEIN 263


>UniRef50_Q7QWI0 Cluster: GLP_538_26473_24605; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_538_26473_24605 - Giardia lamblia
           ATCC 50803
          Length = 622

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +2

Query: 461 IFESSLVNLKNVSPKLSTYILNLQIIRYVDSRQSFLSISVSDFPM 595
           +  ++LV LK  SP    YI++  I RYV S  S  SI   +FP+
Sbjct: 365 VTNTALVELKGKSP---AYIISSYIDRYVSSYSSMTSIEAPNFPL 406


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,911,822
Number of Sequences: 1657284
Number of extensions: 9450241
Number of successful extensions: 17837
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17836
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)