Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_G02
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    27   0.097
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    27   0.17 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    26   0.29 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.8  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 27.5 bits (58), Expect = 0.097
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +2

Query: 104 YIIFIVKICNHFKKTTRNETIISLMRPFSKNTKFRLKQLQYITNFL 241
           +I+ ++ ICN    T     I  L+      +KFR   L++  N L
Sbjct: 279 FIVNVLYICNQCYNTVEESRIFGLVTFTPDRSKFRPSSLRFCLNIL 324


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 267 LLHNITTVYRKLVMYCNCFNLNFVFLENGLIRLMMV 160
           LLH + T Y  L+  CN   L F+ L+   I L ++
Sbjct: 279 LLHLVVTPYYLLIEVCNAGYLPFILLQVAWIVLHLI 314


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 107 IIFIVKICNHFKKTTRNETIISLMRPFSKNTKFRLK 214
           ++ +VK C H +K    ++ I +  PF ++   RLK
Sbjct: 110 VLHVVKQCYHLQKINVQQSGIFINLPFLEHNLIRLK 145


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 342 LC*LHIIHLFVIFEFTLKCKFN*FPL 265
           LC  +    F+IF     C F+ +PL
Sbjct: 296 LCIYYFCRAFIIFPTHFYCAFSLYPL 321



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = +1

Query: 13  LLLVXTS*IYL--ILI*CTSVIVGQCQIFLNGLYYIHC 120
           LLLV     Y   +L  C  +I     +FL  +YY +C
Sbjct: 253 LLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYC 290


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 494 VSPKLSTYILNLQIIRYVDSRQSFLSISVSDFP 592
           V+P L +Y L++ I+   D++   L   +  FP
Sbjct: 118 VNPYLFSYALSVAILHRQDTQDIDLPSFIESFP 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,347
Number of Sequences: 336
Number of extensions: 2879
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)