Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_G01
         (774 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD...    36   1.5  
UniRef50_A0EI60 Cluster: Chromosome undetermined scaffold_98, wh...    35   2.6  
UniRef50_A6UNN2 Cluster: Putative uncharacterized protein; n=1; ...    34   4.5  
UniRef50_Q4UFI5 Cluster: Cation-transporting ATPase; n=1; Theile...    33   7.9  
UniRef50_O97234 Cluster: Putative uncharacterized protein MAL3P2...    33   7.9  

>UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD
           protein - Plasmodium falciparum
          Length = 960

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 20/54 (37%), Positives = 33/54 (61%)
 Frame = +2

Query: 104 MIQERVVYKSINNNKIFSIVISFLMYSL*NFNLKFIISKLGALLTFTRIIHFYK 265
           +I +  +YK +N NKIF ++I+F  Y    FNL F+++K+  L  +  I+  YK
Sbjct: 349 LIYKIYLYK-LNINKIFKLIINFKKYINIKFNLIFLMNKI--LYNYNNILFEYK 399


>UniRef50_A0EI60 Cluster: Chromosome undetermined scaffold_98, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_98,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 428

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 17/37 (45%), Positives = 27/37 (72%)
 Frame = +3

Query: 357 RVRLVSKLAYEIIETKSISLTLNLTLIVMFVLFEQKI 467
           ++ L++K  YE++  KS +L LNLTL+VM+ LF + I
Sbjct: 87  KITLINKNVYELL--KSPNLDLNLTLLVMYNLFSEPI 121


>UniRef50_A6UNN2 Cluster: Putative uncharacterized protein; n=1;
           Methanococcus vannielii SB|Rep: Putative uncharacterized
           protein - Methanococcus vannielii SB
          Length = 187

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = +2

Query: 98  NNMIQERVVYKSINNNKIFSI-VISFLMYSL*NFNLKFIISKLGALLTFTRIIHFYKGQL 274
           N +I   +++   N N +FSI ++  L + L NF  KFI+  L  +LTF  +I F+K + 
Sbjct: 98  NYLILILIIFGIFNIN-LFSIGILILLFFKLKNFLNKFILVLLIPILTF--LIMFFKYEY 154

Query: 275 FLVFGNFLQRI 307
           FL   N++Q++
Sbjct: 155 FL-NQNYIQKV 164


>UniRef50_Q4UFI5 Cluster: Cation-transporting ATPase; n=1; Theileria
            annulata|Rep: Cation-transporting ATPase - Theileria
            annulata
          Length = 2559

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +2

Query: 131  SINNNKIFSIVISFLMYSL*NFNL-KFIISKLGALLTFTRIIHFYKGQLFLVFGNFLQRI 307
            SIN N +F  +I+F++ S+ N N+ +  +     L+ +   I ++  + F +  +F+  +
Sbjct: 2119 SINENALFIFLITFIVQSIININVPRIYVQDNSKLIVYLNYILYWTVRCFFILMSFILWM 2178

Query: 308  LF 313
            LF
Sbjct: 2179 LF 2180


>UniRef50_O97234 Cluster: Putative uncharacterized protein MAL3P2.13;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL3P2.13 - Plasmodium falciparum
            (isolate 3D7)
          Length = 1446

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 207  NFKLKFHNEYIKKDITIENILLLLIDLY 124
            N  LKFHN+Y+KK    +N+L L+ + Y
Sbjct: 1187 NSSLKFHNQYVKKKKYSDNVLFLINEKY 1214


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,437,287
Number of Sequences: 1657284
Number of extensions: 9159194
Number of successful extensions: 20591
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20581
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)