Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F24
         (334 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.48 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   0.64 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   1.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   1.9  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   5.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   5.9  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    20   5.9  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    20   7.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   7.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.48
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 168 CIYFTCCVLCIFRLLTSWLFCLH 100
           CIY+  C   IF +   +L C++
Sbjct: 145 CIYYFYCAFIIFTVHLLFLLCIY 167



 Score = 22.6 bits (46), Expect = 1.1
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 192 CLHRPSCRCIYFTCCVLCIFRLLTSWLFCLHLLGPIHLL 76
           C++   C  I FT  V  +F L     FC  ++  +HLL
Sbjct: 145 CIYYFYCAFIIFT--VHLLFLLCIYHFFCAFIIFTMHLL 181



 Score = 21.0 bits (42), Expect = 3.4
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -2

Query: 168 CIYFTCCVLCIFRLLTSWLFCLHLLGPIHLL 76
           CIY+      +F +    L C++    +HLL
Sbjct: 237 CIYYFYYAFILFTVHLLLLVCIYYFYYMHLL 267



 Score = 20.2 bits (40), Expect = 5.9
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -2

Query: 153 CCVLCIFRLLTSWLFCLH 100
           CC   IF +   +L C++
Sbjct: 269 CCAFIIFTMHLLFLLCIY 286


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.4 bits (48), Expect = 0.64
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 162 YFTCCVLCIFR 130
           YF C ++CIFR
Sbjct: 160 YFLCVIVCIFR 170


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 288 VRVHFNQHVQISAVRCYSCVCCRKAF 211
           V  H   H   S  R Y C  C+KAF
Sbjct: 65  VTTHMRTH---SGERPYRCRLCKKAF 87


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 288 VRVHFNQHVQISAVRCYSCVCCRKAF 211
           V  H   H   S  R Y C  C+KAF
Sbjct: 321 VTTHMRTH---SGERPYRCRLCKKAF 343


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 123 TSWLFCLHLLG 91
           T WL CL LLG
Sbjct: 5   TYWLCCLLLLG 15


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 123 TSWLFCLHLLG 91
           T WL CL LLG
Sbjct: 5   TYWLCCLLLLG 15


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 246 RCYSCVCCRKAF 211
           R YSC  C KAF
Sbjct: 106 RPYSCDICGKAF 117


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -2

Query: 234 CVCCRKAF 211
           C CCR++F
Sbjct: 81  CYCCRESF 88


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 11  SVSHNRNSIAFKIAFWLSIS 70
           S+SH      FK   WL +S
Sbjct: 383 SLSHGGQLARFKCLSWLDLS 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,047
Number of Sequences: 336
Number of extensions: 1020
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)