Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F24
         (334 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    22   5.3  
EF426178-1|ABO26421.1|  155|Anopheles gambiae unknown protein.         22   7.0  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    22   7.0  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    21   9.3  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    21   9.3  

>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 56  WLSISERSKCMGPSRCRQNSQ 118
           WLS+S++ KC     C    Q
Sbjct: 49  WLSVSQQEKCPLNKYCENKIQ 69


>EF426178-1|ABO26421.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 315 SAF*E*YLVVRVHFNQHVQISAVRCYSC 232
           S+F   YL     F Q V  SA+RCY C
Sbjct: 7   SSFLAAYLFFGALFAQSV--SALRCYQC 32


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 329 ELIVHRHFENNTWS 288
           E IVH + EN  WS
Sbjct: 7   EKIVHNYLENPLWS 20


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 115 AILPTPTRPHTL 80
           A+ P PT+PH L
Sbjct: 176 AVQPAPTQPHEL 187


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 297 YLVVRVHFNQHVQISAVRCYSCV 229
           Y +  V    H  I  +RCY C+
Sbjct: 388 YTMCAVKEAPHTPIEKLRCYRCL 410


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,788
Number of Sequences: 2352
Number of extensions: 3853
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23342418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)