Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_F24
(334 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95559-7|CAB76730.2| 329|Caenorhabditis elegans Hypothetical pr... 28 1.9
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 28 1.9
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 26 5.7
U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical pr... 26 5.7
AF045645-5|AAL06039.2| 140|Caenorhabditis elegans Ground-like (... 26 5.7
Z78410-11|CAB01639.2| 315|Caenorhabditis elegans Hypothetical p... 26 7.5
U32305-6|AAV58892.1| 411|Caenorhabditis elegans Hypothetical pr... 26 7.5
U32305-5|AAK18855.2| 501|Caenorhabditis elegans Hypothetical pr... 26 7.5
AC024756-4|AAX88819.1| 639|Caenorhabditis elegans Hypothetical ... 26 7.5
Z82263-6|CAJ76936.1| 383|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z82263-3|CAB62793.2| 451|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z82263-2|CAE46670.1| 445|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z35600-4|CAB54236.1| 137|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 25 10.0
U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical p... 25 10.0
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 25 10.0
>Z95559-7|CAB76730.2| 329|Caenorhabditis elegans Hypothetical
protein Y41E3.14 protein.
Length = 329
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 171 RCIYFTCCVLCIFRLLTSWLF-CLHLLGP 88
R I+ CC++C F T+ ++ L L+ P
Sbjct: 238 RAIFIQCCIICFFNTATALIYNALSLMTP 266
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 11 SVSHNRNSIAFKIAFWLSISERSKCMGPSRCRQNSQEVSR--RNMQSTQQ 154
SVS + N + + +S S+C+G +C NSQ +S + Q TQQ
Sbjct: 381 SVSCSTNQVCISNQCYNYVSIGSQCVGSQQCLSNSQCISSICQCPQGTQQ 430
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 56 WLSISERSKCMGPSRCRQNSQ-EVSRRNMQSTQQVKYMQRQLGRCRQLGTHTP 211
WL + E + P+R + SQ + N+Q+ QQ + Q+Q G R G P
Sbjct: 1890 WLRMRENQNLV-PNRMQGYSQMSMGSSNLQNLQQQQLQQQQAGAMRGGGGFAP 1941
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 56 WLSISERSKCMGPSRCRQNSQ-EVSRRNMQSTQQVKYMQRQLGRCRQLGTHTP 211
WL + E + P+R + SQ + N+Q+ QQ + Q+Q G R G P
Sbjct: 1879 WLRMRENQNLV-PNRMQGYSQMSMGSSNLQNLQQQQLQQQQAGAMRGGGGFAP 1930
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2
Query: 234 CVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLC 139
C CC G C RP C C CC C
Sbjct: 77 CGCCGCGCGC----CCCRPRCCCCCRRCCTCC 104
>U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical
protein H03E18.2 protein.
Length = 204
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -2
Query: 132 RLLTSWLFCLHLLGPIHLLRSLIDNQKAILN 40
+LL S LFCLHL GP L S +D +K +++
Sbjct: 171 QLLVS-LFCLHLSGP---LFSWLDTEKKLIS 197
>AF045645-5|AAL06039.2| 140|Caenorhabditis elegans Ground-like (grd
related) protein26 protein.
Length = 140
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 165 CSGNWGGVGNWVLIHQRLCGSKRKNSSEQQKFE 263
C+G +GG G Q CG K+++ E ++ E
Sbjct: 23 CAGLFGGGGGGGCCCQSACGRKKRSIDEDERRE 55
>Z78410-11|CAB01639.2| 315|Caenorhabditis elegans Hypothetical
protein C51E3.4 protein.
Length = 315
Score = 25.8 bits (54), Expect = 7.5
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = -2
Query: 183 RPSCRCIYFTCCVLCIFRLLTSWLFCLHLLG 91
R C + C+ + L +++C+HL G
Sbjct: 41 RSPCHILISLTCICDLLHLCAQFVYCVHLFG 71
>U32305-6|AAV58892.1| 411|Caenorhabditis elegans Hypothetical
protein B0336.7b protein.
Length = 411
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 297 YLVVRVHFNQHVQISAVRCYSCVCCRKA 214
+L HFN++ ++ + Y+C+ CRKA
Sbjct: 186 HLYYEFHFNRY-GLNNTKFYACLSCRKA 212
>U32305-5|AAK18855.2| 501|Caenorhabditis elegans Hypothetical
protein B0336.7a protein.
Length = 501
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 297 YLVVRVHFNQHVQISAVRCYSCVCCRKA 214
+L HFN++ ++ + Y+C+ CRKA
Sbjct: 276 HLYYEFHFNRY-GLNNTKFYACLSCRKA 302
>AC024756-4|AAX88819.1| 639|Caenorhabditis elegans Hypothetical
protein Y34D9A.3 protein.
Length = 639
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -2
Query: 297 YLVVRVHFNQHVQISAVRCYSCVCCRKAF 211
Y +++++F + S + C+SC C +K F
Sbjct: 131 YAILKLYFLCRNRKSKLECFSCGCVQKYF 159
>Z82263-6|CAJ76936.1| 383|Caenorhabditis elegans Hypothetical
protein C47A4.2c protein.
Length = 383
Score = 25.4 bits (53), Expect = 10.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 165 IYFTCCVLCIFRLLTSWLFC 106
IYF +L +F L SW FC
Sbjct: 160 IYFGISLLILFVCLVSWWFC 179
>Z82263-3|CAB62793.2| 451|Caenorhabditis elegans Hypothetical
protein C47A4.2b protein.
Length = 451
Score = 25.4 bits (53), Expect = 10.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 165 IYFTCCVLCIFRLLTSWLFC 106
IYF +L +F L SW FC
Sbjct: 228 IYFGISLLILFVCLVSWWFC 247
>Z82263-2|CAE46670.1| 445|Caenorhabditis elegans Hypothetical
protein C47A4.2a protein.
Length = 445
Score = 25.4 bits (53), Expect = 10.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 165 IYFTCCVLCIFRLLTSWLFC 106
IYF +L +F L SW FC
Sbjct: 222 IYFGISLLILFVCLVSWWFC 241
>Z35600-4|CAB54236.1| 137|Caenorhabditis elegans Hypothetical
protein F37A8.5 protein.
Length = 137
Score = 25.4 bits (53), Expect = 10.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 270 QHVQISAVRCYSCVCCR 220
QH + RCYSC+ CR
Sbjct: 24 QHYLPAGDRCYSCIHCR 40
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical protein
F40F12.5 protein.
Length = 1144
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = -2
Query: 201 VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLFCLHLLGPIHLLRSLIDNQ 55
VP+C +C +Y C L + +FC HLL + D++
Sbjct: 955 VPACSKCQACSEVYCPTCFLTRRVFYSEVIFCRKCFHHTHLLPEIEDHK 1003
>U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical
protein F19F10.10 protein.
Length = 891
Score = 25.4 bits (53), Expect = 10.0
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +2
Query: 65 ISERSKCMGPSRCRQNSQEVSRRNMQSTQQVKY 163
+S+ +KC G R R+N + ++ Q + +Y
Sbjct: 342 LSDTTKCSGEGRLRKNFTDTFKKVTQGSASTRY 374
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 25.4 bits (53), Expect = 10.0
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = -2
Query: 234 CVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLC 139
C C G C RP C C CC C
Sbjct: 72 CCGCGGGGGGGCGCCCCRPKCCCCCRRCCTCC 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,831,905
Number of Sequences: 27780
Number of extensions: 98177
Number of successful extensions: 352
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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