Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F23
         (545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 178 CCMRWQLRSGLRDHLR 225
           C M+W L S +  HLR
Sbjct: 524 CGMKWPLLSTINRHLR 539


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +1

Query: 370 PQLRVLPALVVQERQALR 423
           P+L+  PA++V +R++LR
Sbjct: 181 PRLQRCPAMLVFDRRSLR 198


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -3

Query: 165 ASPQATPPPTVDPDRMKNXKPET*MXIETMSCFG 64
           ASP +      DP++MKN         ET +  G
Sbjct: 106 ASPDSFVAAANDPEKMKNMTSSAIEFFETYNYDG 139


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 274 LWVVRSHLLPRLPQEASSPVSSY 342
           LWV  SH++ +L +  S   S Y
Sbjct: 262 LWVDLSHMMQQLGKAYSGMYSMY 284


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 274 LWVVRSHLLPRLPQEASSPVSSY 342
           LWV  SH++ +L +  S   S Y
Sbjct: 262 LWVDLSHMMQQLGKAYSGMYSMY 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,271
Number of Sequences: 336
Number of extensions: 1841
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)