Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_F23
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 32 0.31
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.41
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.41
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 31 0.41
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 31 0.41
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 31 0.41
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 31 0.54
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 31 0.54
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 31 0.72
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 30 1.2
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 29 2.2
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 28 3.8
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 28 3.8
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 28 3.8
U40935-5|AAM29686.1| 441|Caenorhabditis elegans Hypothetical pr... 28 3.8
U40935-4|AAM29687.1| 436|Caenorhabditis elegans Hypothetical pr... 28 3.8
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 28 3.8
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 28 3.8
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 28 3.8
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 28 3.8
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 28 3.8
Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical pr... 28 5.0
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 28 5.0
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 28 5.0
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 28 5.0
Z36238-1|CAA85275.2| 400|Caenorhabditis elegans Hypothetical pr... 27 6.7
AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical... 27 6.7
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 27 8.8
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 31.9 bits (69), Expect = 0.31
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -3
Query: 288 SHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDR 121
+HHP P P Q + E P +P+ + P TA A+P AT PT DP +
Sbjct: 215 AHHP--PAPPIRQAAHAAESSPPPIPQRKSSAPAPTA----AAPPATKEPT-DPKK 263
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.41
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCGRASGTTC-GPTSPSEEHWEERGCGHSG 280
G GGG CG C G CG G C G +S GCG G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Score = 31.5 bits (68), Expect = 0.41
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 270 PHPRSSQCSSDG-EVGPQVVPEARPQLPTHTAQVEEASPQATP 145
P P ++ SS G G + PEA P P+ EA+P+A P
Sbjct: 456 PAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAP 498
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 243 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 145
S G G + PEA P P+ EA+P+A P
Sbjct: 484 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 516
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 243 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 145
S G G + PEA P P+ EA+P+A P
Sbjct: 502 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 534
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 243 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 145
S G G + PEA P P+ EA+P+A P
Sbjct: 520 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 552
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 243 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 145
S G G + PEA P P+ EA+P+A P
Sbjct: 538 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 570
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEEHWEERGC--GHSGWC 286
G GGG CG C G CG G CG GC G SG C
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCG-GGGGGCGGGGGGCGGGGGGGCGGGSSGGC 147
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.41
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCGRASGTTC-GPTSPSEEHWEERGCGHSG 280
G GGG CG C G CG G C G +S GCG G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Score = 31.5 bits (68), Expect = 0.41
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 270 PHPRSSQCSSDG-EVGPQVVPEARPQLPTHTAQVEEASPQATP 145
P P ++ SS G G + PEA P P+ EA+P+A P
Sbjct: 456 PAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAP 498
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 243 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 145
S G G + PEA P P+ EA+P+A P
Sbjct: 484 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 516
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 243 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 145
S G G + PEA P P+ EA+P+A P
Sbjct: 502 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 534
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 243 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 145
S G G + PEA P P+ EA+P+A P
Sbjct: 520 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 552
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 243 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 145
S G G + PEA P P+ EA+P+A P
Sbjct: 538 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 570
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEEHWEERGC--GHSGWC 286
G GGG CG C G CG G CG GC G SG C
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCG-GGGGGCGGGGGGCGGGGGGGCGGGSSGGC 147
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 31.5 bits (68), Expect = 0.41
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Frame = -3
Query: 291 TSHHPECPHPRSSQCSSDGEVGPQVVPE-ARPQLPTHTAQVEEASPQAT-----PPPTVD 130
T+H P P S CS V P + P + + SP T PPP
Sbjct: 216 TTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPPPQ 275
Query: 129 PDRMKNXKP 103
P K KP
Sbjct: 276 PPTKKGMKP 284
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 31.5 bits (68), Expect = 0.41
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Frame = -3
Query: 291 TSHHPECPHPRSSQCSSDGEVGPQVVPE-ARPQLPTHTAQVEEASPQAT-----PPPTVD 130
T+H P P S CS V P + P + + SP T PPP
Sbjct: 216 TTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPPPQ 275
Query: 129 PDRMKNXKP 103
P K KP
Sbjct: 276 PPTKKGMKP 284
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 31.5 bits (68), Expect = 0.41
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Frame = -3
Query: 291 TSHHPECPHPRSSQCSSDGEVGPQVVPE-ARPQLPTHTAQVEEASPQAT-----PPPTVD 130
T+H P P S CS V P + P + + SP T PPP
Sbjct: 216 TTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPPPQ 275
Query: 129 PDRMKNXKP 103
P K KP
Sbjct: 276 PPTKKGMKP 284
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEEHWEERGCGHSG 280
G GGG CG C G CG G G P GCG G
Sbjct: 76 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCGRASGTTCG 226
G GGG CG C G CG G CG
Sbjct: 147 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 179
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +2
Query: 113 FFIRSGSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEEHWEERGCGHSG 280
F SG GGG CG C G G G C P P GCG G
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGG--CAPPPPPPAC--GGGCGGGG 69
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -3
Query: 270 PHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDP 127
P P +S SS G P P ARP+ P +A+ PPP P
Sbjct: 673 PTPEAS--SSTGTSAPARPPPARPEAPKKDETAVDAAAPPRPPPAARP 718
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 31.1 bits (67), Expect = 0.54
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEEH 250
G GGG +CG ++ C G G S + C P + + H
Sbjct: 2136 GGCSGGGNSCGGGCNSGGSCGGGGGGCSSSCCQPQTSATSH 2176
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 30.7 bits (66), Expect = 0.72
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -3
Query: 294 MTSHHPECPHPRSSQCSSDGEVGPQVVPEARP--QLPTHTAQV--EEASPQA--TPPPTV 133
+T+ P P P + + + P PE P Q+P TAQ+ E A P+A P PT
Sbjct: 372 LTTPPPPAPPPPAPAVPEEAQA-PTPAPEEAPEAQIPAETAQIPPENAVPEAPEEPAPTT 430
Query: 132 DP 127
P
Sbjct: 431 TP 432
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 201 PQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPET 97
PQ+P Q + +P+ T PPT P N P T
Sbjct: 762 PQVPLPVVQTTQTAPKPTLPPTTLPVLTTNKTPRT 796
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +2
Query: 125 SGSTVGGGVACGDASSTCAVCVG-NCGRASGTTCGP 229
S GGG G C C G NCG +G CGP
Sbjct: 17 SAQCFGGGCGGGCFGGNCGGCSGNNCG-CNGNNCGP 51
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = -3
Query: 279 PECPHPRSSQCSSDGEVGPQVVPEARP--QLPTHTAQV--EEASPQA--TPPPTVDP 127
P P P + + + P PE P Q+P TAQ+ E A P+A P PT P
Sbjct: 389 PPAPPPPAPAVPEEAQA-PTPAPEEAPEAQIPAETAQIPPENAVPEAPEEPAPTTTP 444
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 213 PEARPQLPTHTAQVEEASPQATPPP 139
P P L T T +E+ P TPPP
Sbjct: 191 PSEPPLLTTPTTPIEDPEPYVTPPP 215
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -3
Query: 234 EVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
EV P PE P+ E P+ P P +P+ +PE
Sbjct: 67 EVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPE 111
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 231 VGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
V P+ PE P+ E P+ P P V+P +PE
Sbjct: 36 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPE 79
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -3
Query: 234 EVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
EV P PE P+ E P+ P P +P+ +PE
Sbjct: 67 EVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPE 111
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 231 VGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
V P+ PE P+ E P+ P P V+P +PE
Sbjct: 36 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPE 79
>U40935-5|AAM29686.1| 441|Caenorhabditis elegans Hypothetical
protein F31E3.2a protein.
Length = 441
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 222 QVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
Q + + RP L T +VEEA P+ P + D KPE
Sbjct: 56 QKLKKCRPHLKRRTYKVEEADPRPPVPRFIVDDYGDYEKPE 96
>U40935-4|AAM29687.1| 436|Caenorhabditis elegans Hypothetical
protein F31E3.2b protein.
Length = 436
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 222 QVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
Q + + RP L T +VEEA P+ P + D KPE
Sbjct: 56 QKLKKCRPHLKRRTYKVEEADPRPPVPRFIVDDYGDYEKPE 96
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -3
Query: 234 EVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
EV P PE P+ E P+ P P +P+ +PE
Sbjct: 45 EVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPE 89
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 231 VGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
V P+ PE P+ E P+ P P V+P +PE
Sbjct: 14 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPE 57
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -3
Query: 234 EVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
EV P PE P+ E P+ P P +P+ +PE
Sbjct: 45 EVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPE 89
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 231 VGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
V P+ PE P+ E P+ P P V+P +PE
Sbjct: 14 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPE 57
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -3
Query: 234 EVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
EV P PE P+ E P+ P P +P+ +PE
Sbjct: 67 EVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPE 111
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 231 VGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
V P+ PE P+ E P+ P P V+P +PE
Sbjct: 36 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPE 79
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -3
Query: 234 EVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
EV P PE P+ E P+ P P +P+ +PE
Sbjct: 67 EVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPE 111
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 231 VGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
V P+ PE P+ E P+ P P V+P +PE
Sbjct: 36 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPE 79
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -3
Query: 234 EVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
EV P PE P+ E P+ P P +P+ +PE
Sbjct: 67 EVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPE 111
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 231 VGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
V P+ PE P+ E P+ P P V+P +PE
Sbjct: 36 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPE 79
>Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical
protein H13N06.2 protein.
Length = 454
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -3
Query: 270 PHPRSSQCSSDGEVGPQVVPEARPQ---LPTHTAQVEEASPQATPPPTVDPDRMKNXKPE 100
P S++ S +G P P++ + LP+ + Q EEAS Q T P+ + M E
Sbjct: 90 PSLSSAENSGNGPHPPAPPPQSSAESSGLPSSSEQEEEASAQNTTVPSSTEELMTLGVTE 149
Query: 99 T*MXIE 82
T M E
Sbjct: 150 TNMKTE 155
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 225 PQVVPEARPQLPTHTAQVEEASPQATPPPT 136
P VP RP+ P + E+ Q T PPT
Sbjct: 4536 PDFVPPERPETPETVLEEEKPLNQETSPPT 4565
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 225 PQVVPEARPQLPTHTAQVEEASPQATPPPT 136
P VP RP+ P + E+ Q T PPT
Sbjct: 4528 PDFVPPERPETPETVLEEEKPLNQETSPPT 4557
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 71 QLIVSIXI*VSGXQFFIRSGSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPT 232
+++V + + V Q F+ G GGG CG C G CG G C PT
Sbjct: 2 RVLVVVSLIVVSTQAFLFPGG--GGGGGCGGG------CGGGCGGGGGGGCLPT 47
>Z36238-1|CAA85275.2| 400|Caenorhabditis elegans Hypothetical
protein R74.2 protein.
Length = 400
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEE 247
G GGG G S G CG SGT CG + E+
Sbjct: 199 GGGCGGGYPQGYGSYAGYGNSGGCGGGSGTGCGGYNDDED 238
>AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical
protein Y73B3A.5 protein.
Length = 310
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/66 (27%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Frame = -3
Query: 291 TSHHPECPHPRSSQCSSDGEVGPQVVPE-ARPQLPTHTAQVEEASPQATPPPTV--DPDR 121
T+H P P S CS V P + P + + S TP T P
Sbjct: 121 TTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSSSTTPSTTAPPQPPT 180
Query: 120 MKNXKP 103
K KP
Sbjct: 181 KKGMKP 186
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/51 (27%), Positives = 18/51 (35%)
Frame = -3
Query: 279 PECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDP 127
P P P + + PQ P+ PQ E P+ P P V P
Sbjct: 98 PPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQPEPHPEPAPEPIVKP 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,790,086
Number of Sequences: 27780
Number of extensions: 178569
Number of successful extensions: 1069
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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