Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F21
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93396-3|CAB07712.1|  597|Caenorhabditis elegans Hypothetical pr...    31   0.88 
Z81130-10|CAB03418.1|  653|Caenorhabditis elegans Hypothetical p...    27   8.2  
Z81130-9|CAI70413.1|  616|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z93396-3|CAB07712.1|  597|Caenorhabditis elegans Hypothetical
           protein ZC15.5 protein.
          Length = 597

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 20/66 (30%), Positives = 30/66 (45%)
 Frame = -2

Query: 581 YFSQFSLMSVRPKILXLR*RQICVYGTF*DRKNIFLDFYLPIRNFSQIYFIVIN*TSMGN 402
           +F   S ++  P++L  R   +    TF  RK IFL+F++P R     Y       S G+
Sbjct: 158 FFGTLSPVAKTPRLLNKRSYVVLKLFTF-QRKTIFLEFWVPPRKLLGTYIASTTQMSPGS 216

Query: 401 ITPTHF 384
               HF
Sbjct: 217 RISYHF 222


>Z81130-10|CAB03418.1|  653|Caenorhabditis elegans Hypothetical
           protein T23G11.6a protein.
          Length = 653

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +2

Query: 458 LVDKNPKKYSCDLKKSHKRKSVFNEGXEF*AELTLGKIAKNMVISVI 598
           L  + P++   DL K+   K V+N+   +   +T+G I    VI ++
Sbjct: 557 LFKEEPRRDVYDLSKTDDAKGVYNQKGTYAVPITIGAIGLVTVIVIV 603


>Z81130-9|CAI70413.1|  616|Caenorhabditis elegans Hypothetical
           protein T23G11.6b protein.
          Length = 616

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +2

Query: 458 LVDKNPKKYSCDLKKSHKRKSVFNEGXEF*AELTLGKIAKNMVISVI 598
           L  + P++   DL K+   K V+N+   +   +T+G I    VI ++
Sbjct: 557 LFKEEPRRDVYDLSKTDDAKGVYNQKGTYAVPITIGAIGLVTVIVIV 603


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,281,051
Number of Sequences: 27780
Number of extensions: 242043
Number of successful extensions: 527
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)