Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_F19
(676 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 257 2e-67
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 204 1e-51
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 155 7e-37
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 134 2e-30
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 119 7e-26
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 118 1e-25
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 117 3e-25
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 110 3e-23
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 103 4e-21
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 102 9e-21
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 94 3e-18
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 90 5e-17
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 89 9e-17
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 83 5e-15
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 82 1e-14
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 76 7e-13
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 66 7e-10
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 64 2e-09
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 63 5e-09
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 60 5e-08
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 46 0.001
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 44 0.003
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 44 0.003
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 43 0.008
UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2; ... 40 0.055
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 39 0.13
UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Re... 38 0.29
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 37 0.39
UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1... 37 0.51
UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila pseudoobscu... 37 0.51
UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia fuc... 37 0.51
UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.90
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 36 0.90
UniRef50_Q9C5C0 Cluster: Mitogen-activated protein kinase 18; n=... 35 1.6
UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 1... 35 1.6
UniRef50_UPI000150A5BE Cluster: hypothetical protein TTHERM_0006... 35 2.1
UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 35 2.1
UniRef50_Q6NE17 Cluster: Putative erythrocyte-binding protein MA... 34 2.7
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 34 2.7
UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr prote... 34 3.6
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 34 3.6
UniRef50_Q4SP98 Cluster: Chromosome 15 SCAF14542, whole genome s... 33 4.8
UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3
UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas v... 33 6.3
UniRef50_Q9PQ05 Cluster: Unique hypothetical membrane lipoprotei... 33 8.4
UniRef50_Q1MQI5 Cluster: Outer membrane protein; n=1; Lawsonia i... 33 8.4
UniRef50_Q23MI1 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_A3LNR4 Cluster: Predicted protein; n=5; Saccharomycetal... 33 8.4
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 257 bits (630), Expect = 2e-67
Identities = 123/172 (71%), Positives = 145/172 (84%)
Frame = -1
Query: 676 FNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 497
+NKDQG TR+FRNIPGV+ LAPGGH+GRF+IWTQSAF RLD +FGSWKTP
Sbjct: 76 YNKDQGLTRSFRNIPGVDMVNVNKLNLLHLAPGGHVGRFMIWTQSAFERLDAIFGSWKTP 135
Query: 496 SKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNP 317
SK+KKNFNLPQPKMANTDL+RLLKS+EIR+VLRAP KRV+RATRKLNPLTN KAMLKLNP
Sbjct: 136 SKEKKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVRATRKLNPLTNTKAMLKLNP 195
Query: 316 YAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRKNI 161
YAAVLK+KA+L+ +RKN +AL AEK G+KL +PA+KA KL+E+R K+I
Sbjct: 196 YAAVLKKKAVLDQVKRKNKRALEVAEKRGIKLPDDDPAVKALKLKEKRAKSI 247
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 204 bits (499), Expect = 1e-51
Identities = 99/170 (58%), Positives = 123/170 (72%)
Frame = -1
Query: 676 FNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 497
++KD+G +AFRNIPG+E LAPGGH+GRFVIWT+SAF RL+ LFG+WK P
Sbjct: 214 YDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKP 273
Query: 496 SKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNP 317
S KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNP
Sbjct: 274 STLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNP 333
Query: 316 YAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRK 167
YA VLKR+A L +R K LA A+K ++L+K + A A K R K
Sbjct: 334 YAEVLKRRAALAAEKRTVAKVLAKAKKQNVELAKSHFANVATKAAANRAK 383
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 155 bits (377), Expect = 7e-37
Identities = 77/164 (46%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Frame = -1
Query: 676 FNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 497
+N+D G +AFRNIPG+ LAPGGH+GRF IWT+SAF +LD L+G+W+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270
Query: 496 SKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNP 317
+ K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNP
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNP 330
Query: 316 YAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEK 188
YA ++R IL R L+ A A + L+ A A K
Sbjct: 331 YAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 134 bits (323), Expect = 2e-30
Identities = 74/153 (48%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
Frame = -1
Query: 676 FNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 497
+++D G TRAFRNIPGVE LAPGGH+GRF+IWT+SAF +LD +FG+ +
Sbjct: 214 YSEDNGVTRAFRNIPGVELCSVDRLGLLTLAPGGHVGRFIIWTKSAFEKLDSIFGTSTSK 273
Query: 496 SKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR--ATRKLNPLTNNKAMLKL 323
S KK + P MA TDLTRL+ SDEI+ L AP IR A K NPL N AM KL
Sbjct: 274 SASKKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIRAHAPLKRNPLKNKSAMDKL 333
Query: 322 NPYAAVLKR-KAILELRRRKNLKALADAEKSGL 227
NPYA V + +A + R K A ++A +S +
Sbjct: 334 NPYAKVAREMQARAQEERSKAKAAKSNAARSAV 366
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 119 bits (286), Expect = 7e-26
Identities = 66/161 (40%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
Frame = -1
Query: 676 FNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 497
FN++ +AFRN+PGVE LAPGG LGRFVIWTQSAF LD LFG+++
Sbjct: 213 FNENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFAHLDKLFGTYRYA 272
Query: 496 SKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNPLTNNKAMLKLN 320
S K + L +P + N DL R++ S++++ KV A +V+ +K NPL N KAM +LN
Sbjct: 273 SVLKDGYQLLRPLLTNPDLARIINSNQVQEKVQPAKTTKVLHDVQKKNPLKNTKAMDRLN 332
Query: 319 PYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMK 197
PYA + A+ ++ A G K K+N A+K
Sbjct: 333 PYAKKQRAAAVAAIK----------ANTKGTKKIKKNKALK 363
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 118 bits (284), Expect = 1e-25
Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 1/163 (0%)
Frame = -1
Query: 676 FNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 497
FN++ +AFRN+PGVE LAPGG LGRFVIWTQSAF LD LFG+++
Sbjct: 59 FNENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFANLDKLFGTYRYS 118
Query: 496 SKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNPLTNNKAMLKLN 320
S K + L +P + N DL R++ S++++ KV A V+ +K NPL N+KA+ +LN
Sbjct: 119 SILKDGYQLLRPLLTNPDLARIINSNQVQEKVQAAKQTTVLHEVQKKNPLKNSKALDRLN 178
Query: 319 PYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAE 191
PYA ++R A A +G K K+N A+K +
Sbjct: 179 PYAK----------KQRAAATAAVKAHTTGTKKIKKNKALKKQ 211
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 117 bits (281), Expect = 3e-25
Identities = 60/127 (47%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Frame = -1
Query: 652 RAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFN 473
+AFRNIPGVE LAPGGHLGRF++WT SAFG LD ++GS PS KK+F
Sbjct: 201 KAFRNIPGVETSSVYSMNLLQLAPGGHLGRFIVWTSSAFGALDTIYGSTTEPSALKKDFL 260
Query: 472 LPQPKMANTDLTRLLKSDEIRKVLR-----APNKRVIRATRKLNPLTNNKAMLKLNPYAA 308
LP M DL++++ S +I+KVLR A +KR + +K NPL N + L+LNPYAA
Sbjct: 261 LPSTMMKQPDLSKIINSSDIQKVLRPVRGGAVSKRGV--VQKKNPLKNFQVQLRLNPYAA 318
Query: 307 VLKRKAI 287
++ +
Sbjct: 319 TFSKEKL 325
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 110 bits (265), Expect = 3e-23
Identities = 57/125 (45%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Frame = -1
Query: 652 RAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFN 473
RAFRN+PGVE LAPGGHLGRF+IW+ SAF LD ++G+ PS KK+F
Sbjct: 224 RAFRNLPGVETCDVYSLNLLQLAPGGHLGRFIIWSSSAFKALDNIYGTTTAPSALKKDFL 283
Query: 472 LPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI--RA-TRKLNPLTNNKAMLKLNPYAAVL 302
LP ++ D+ RL+ S E++ V+RA + RA +K NPL N + +L+LNPYAA
Sbjct: 284 LPSNVVSQADIGRLINSSELQSVIRAAKGSALTKRAGVQKKNPLLNKQVLLRLNPYAAGY 343
Query: 301 KRKAI 287
++ I
Sbjct: 344 SKEKI 348
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 103 bits (247), Expect = 4e-21
Identities = 52/118 (44%), Positives = 71/118 (60%)
Frame = -1
Query: 541 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 362
AF +LD L+G+W + K N+NLP KM NTDL+R+LKS EI++ L+AP K++ R K
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQRALQAPRKKIHRRVLK 154
Query: 361 LNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEK 188
NPL N MLKLNPYA ++R I LR+ KN K D + L+ + +K
Sbjct: 155 KNPLKNLGIMLKLNPYAKTMRRNTI--LRQAKNHKLRMDKSAAALEAKSEEKGVPGKK 210
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 102 bits (244), Expect = 9e-21
Identities = 58/155 (37%), Positives = 88/155 (56%), Gaps = 1/155 (0%)
Frame = -1
Query: 673 NKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPS 494
N D +AFRNIPGV+ LAPG H+GRF+IWT+SAF +L+ +FG+ K +
Sbjct: 214 NDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHIGRFIIWTESAFKKLNTIFGTQKKMA 273
Query: 493 KQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI-RATRKLNPLTNNKAMLKLNP 317
+ K F + +MA D+ R++ + E K+LRA K V+ + ++ NPL N AM+KLNP
Sbjct: 274 QGKSGFRIAHAQMAVPDMKRVVVAAEKAKLLRA--KIVLPKVPKRANPLKNWAAMVKLNP 331
Query: 316 YAAVLKRKAILELRRRKNLKALADAEKSGLKLSKR 212
YA + K + + KA A+ + +K+
Sbjct: 332 YAKIASHKLAQVAKAQAAHKAQYAAKMEKILAAKK 366
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 93.9 bits (223), Expect = 3e-18
Identities = 46/135 (34%), Positives = 75/135 (55%)
Frame = -1
Query: 676 FNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 497
++ D G +AFRNIPGV+ LAPGG +GR IW++ AF +LD ++G
Sbjct: 211 YSXDSGIKKAFRNIPGVDLCNVTKLNLLKLAPGGSIGRLCIWSEDAFKKLDVIYGKTFQK 270
Query: 496 SKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNP 317
KKN+ LP+P + N D+ R++ SD+++ L + T+ N LTN +LNP
Sbjct: 271 YVTKKNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKKRTQNKNSLTNFAVRCRLNP 330
Query: 316 YAAVLKRKAILELRR 272
+L+ A+ ++++
Sbjct: 331 AYKLLRALAVRKMKK 345
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 89.8 bits (213), Expect = 5e-17
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 6/122 (4%)
Frame = -1
Query: 673 NKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPS 494
++++G AFRNI GV+ LAPGGHLGRF+IWT+ A+ +LD L+G+ +
Sbjct: 212 DQNEGLANAFRNISGVDISNVXRLNIRDLAPGGHLGRFIIWTEGAYKKLDKLYGTRFRTA 271
Query: 493 KQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA---PNKRVIRATRKL---NPLTNNKAM 332
K + P P + NTDL+R++ S ++ VL+A +K++I R L + L+ N A
Sbjct: 272 LLKNEYKHPTPSVTNTDLSRIIHSPTVQSVLKARGKQSKKIINVRRNLLIASKLSQNNAR 331
Query: 331 LK 326
+K
Sbjct: 332 IK 333
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 89.0 bits (211), Expect = 9e-17
Identities = 55/167 (32%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Frame = -1
Query: 676 FNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 497
+ +D G +A RNI GV+ LAPGG GR I+T+ A RL ++GS+
Sbjct: 214 YAEDNGIVKAMRNIKGVDTCSVERLNLLRLAPGGTFGRLTIFTKGAIKRLQEIYGSYTHG 273
Query: 496 SKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPN-----KRVIRATRKLNPLTNNKAM 332
S K + LP+P M N D+TR++ S E++ VLR + R+ K N LTN
Sbjct: 274 SSSKVGYTLPRPAMTNADITRIINSTEVQSVLRPLRGFRCMGSMGRSKTKKNNLTNLTKR 333
Query: 331 LKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAE 191
LNP L++ A L L A+ +K+ + K++ K+E
Sbjct: 334 ACLNPAYTSLRKSARLAQIPGTRLHAIKQRQKAANRALKKSIKQKSE 380
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 83.4 bits (197), Expect = 5e-15
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = -1
Query: 541 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRATR 365
AF +LD L+G+W + K N+NLP KM NTDL+R+LK I++ LRAP KR+ R +
Sbjct: 173 AFCKLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRIHRRVLK 232
Query: 364 KLNPLTNNKAMLKLNP 317
K NPL N + MLKLNP
Sbjct: 233 KKNPLKNLRLMLKLNP 248
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/119 (33%), Positives = 69/119 (57%)
Frame = -1
Query: 652 RAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFN 473
R FRN+PGV+ LAPG H GR ++WT+SAF LD ++ + K+N+
Sbjct: 206 RGFRNLPGVDLCHVSSIRLLELAPGSHPGRLILWTKSAFASLDDVYAA-------KQNYT 258
Query: 472 LPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKR 296
LP+ + TD+ R+L+SD ++K P + + RK++P ++ +A+ +L+P V+ +
Sbjct: 259 LPRSCITQTDIERILQSDAVQKTF-VPKRDPLVIERKVDPFSSKEALARLDPSGTVMPK 316
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 76.2 bits (179), Expect = 7e-13
Identities = 51/154 (33%), Positives = 80/154 (51%)
Frame = -1
Query: 676 FNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 497
+N+D+G +AFRNIPGVE LAP +GR +WT+SAF LD ++ S
Sbjct: 208 YNEDKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRLTVWTESAFKALDGIYES---- 263
Query: 496 SKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNP 317
KK F+LP+ M N D+ ++ SD ++ VL K V+ PL + KL+
Sbjct: 264 ---KKRFSLPRSIMTNADIEAVITSDAVQSVLN-EKKEVV-------PLPKCRCCKKLSV 312
Query: 316 YAAVLKRKAILELRRRKNLKALADAEKSGLKLSK 215
A +KA+ E+ L+A +A+++ ++ K
Sbjct: 313 GACEDWQKALKEV---AELRAAQEAKRTSPEVVK 343
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 66.1 bits (154), Expect = 7e-10
Identities = 33/85 (38%), Positives = 46/85 (54%)
Frame = -1
Query: 646 FRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 467
FRNI GV+ LAPGG GR +IWT+SAF +LD +FG + ++ F LP
Sbjct: 217 FRNIRGVDQMSIDSLDLLELAPGGVAGRLIIWTESAFEKLDKIFGGVEREAELTPGFKLP 276
Query: 466 QPKMANTDLTRLLKSDEIRKVLRAP 392
+ + DL L SD ++ +L P
Sbjct: 277 NRIVTHDDLEELFYSDAVQAILDEP 301
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 64.5 bits (150), Expect = 2e-09
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = -1
Query: 460 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL- 284
KM N+DL+R+LK EI++ L+AP K + K NPLTN + MLKLNP A + R IL
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTMHRNTILP 62
Query: 283 ELRRRK-NLKALADAEKSGLKLS---KRNPAMKAEKLRERRRK 167
E R K +K+ ++G +L R A K + RK
Sbjct: 63 EARNHKLQVKSRKQQPRTGSQLGAGCSRGTADKKPAIGREERK 105
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = -1
Query: 652 RAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 482
+AFRNIPGVE LAPGGHLGRFVIWT+S+F +LD ++ S++ ++++
Sbjct: 83 KAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTKSSFEKLDSIYRSFEKKLRRRR 139
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 60.1 bits (139), Expect = 5e-08
Identities = 37/97 (38%), Positives = 49/97 (50%)
Frame = -1
Query: 652 RAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFN 473
RAFRNIPGVE LAP G LGR +W++SAF LD
Sbjct: 213 RAFRNIPGVEVACVERLNLLKLAPAGALGRLCVWSKSAFEALDDYIKM------------ 260
Query: 472 LPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 362
+P + N DL+ L++S ++ LRAP + +ATRK
Sbjct: 261 MPTKLLKNADLSALIESTPVQAALRAPREGTPKATRK 297
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = -1
Query: 673 NKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 524
++ G +A RNIPGV+ LAPGG GR +WT++A G L+
Sbjct: 255 SQTNGLAKAARNIPGVDIVVAKDLSAEDLAPGGDAGRLTVWTKAAIGALE 304
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = -3
Query: 650 RLPQHPRCGAPEC*QAEPTEAGSGRSSWTFRHLDSVRIRQA*PLIRVMEDTIKTKEELQP 471
R+PQH R G EC +AEP G+ W R LD+V +R A + + ++ +E L
Sbjct: 270 RVPQHLRAGPGECERAEPAAPGARWPRWPLRDLDAVCVRAAGQDLWHVHGGVRCEEGLHA 329
Query: 470 APTEDGQH 447
A + +H
Sbjct: 330 AGADADEH 337
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/43 (53%), Positives = 27/43 (62%)
Frame = -1
Query: 652 RAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 524
RAFRNIPGV+ LAP G LGR VI+++SAF LD
Sbjct: 212 RAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIFSKSAFELLD 254
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = -1
Query: 670 KDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSA 539
KD G +A +N+PGV+ LAPG H GR +WT+SA
Sbjct: 200 KDDGVVKAAKNLPGVDAVVVKDLNVELLAPGCHPGRLTVWTKSA 243
>UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 197
Score = 39.9 bits (89), Expect = 0.055
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -1
Query: 403 LRAPNKRV-IRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGL 227
+R +KR+ IR ++K+ + + + M + N +KRK I+ +++R+N+K + +K
Sbjct: 1 MRERSKRIMIRRSKKIMNMKSKRNMKERNKKIMNVKRK-IMNMKKRRNMKKRRNMKKRKN 59
Query: 226 KLSKRNPAMKAEKLRERRRK 167
+RN K +K ER++K
Sbjct: 60 MKKRRNMKRKRKKTMERKKK 79
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 652 RAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 518
++ RNI ++ LAPGGHLGR IW+ AF L+ +
Sbjct: 210 KSLRNIANIDCMKISALNLTKLAPGGHLGRLCIWSSKAFQMLNTI 254
>UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Rep:
Protein SDA1 homolog - Drosophila melanogaster (Fruit
fly)
Length = 712
Score = 37.5 bits (83), Expect = 0.29
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -1
Query: 493 KQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 323
K+KK+ + K A +L TR+ ++ +++ A K+ + + RK PL ++A +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624
Query: 322 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRKN 164
N + K++ + R + ++A D E+ G K + N +R+ KN
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 37.1 bits (82), Expect = 0.39
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -1
Query: 667 DQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLF 515
D+G + RN GV+ LAPG H GR I+T+SA +L LF
Sbjct: 204 DRGISLGARNHAGVDVVEVNNINAELLAPGTHAGRLTIYTKSAIEKLGDLF 254
>UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1;
Flavobacterium psychrophilum JIP02/86|Rep: Putative cell
surface protein SprD - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 1286
Score = 36.7 bits (81), Expect = 0.51
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = -1
Query: 388 KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRN 209
K +++AT+K NP T N + K P +R L L+ K+ KA A+AEK +
Sbjct: 310 KPIVKATKKTNPGTKNATVNKKTPADLQKERAEALALKTEKD-KARAEAEKVRKAKELAD 368
Query: 208 PAMKAEKLRERRR 170
KAE L R+
Sbjct: 369 AKEKAEVLAALRK 381
>UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila
pseudoobscura|Rep: GA20803-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 655
Score = 36.7 bits (81), Expect = 0.51
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Frame = -1
Query: 514 GSWKTPSKQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNN 341
G W T + + + K A +L TR+ ++ +++ A K+ + +RK PL +
Sbjct: 502 GQWVTVNHSDGDLKILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTNSRK-RPLEQD 560
Query: 340 KA-MLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRK 167
+A +KLN + K++ + R + ++A D E+ G K + N +R+ K
Sbjct: 561 RAEFVKLNSIEMIFKKRKHDKESRMETVQAGRQDRERFGWKDGRVNEHCSKTNSEKRKTK 620
Query: 166 N 164
N
Sbjct: 621 N 621
>UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 1521
Score = 36.7 bits (81), Expect = 0.51
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = -1
Query: 439 TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 260
TRL+ E R+ + A N++ ++A + +N+A L+ A+ KR +E R+RK
Sbjct: 975 TRLISQAE-REEIEA-NRQRVQAAAQARKENSNRARLEGRKAASAKKRT--VEYRKRKEK 1030
Query: 259 KALADAEKSGLKLSKRNPAMKAEKLRERRRK 167
+ + +A K G L + +KL E+R +
Sbjct: 1031 ELIEEAHKEGRILGNSELEARLDKLMEKRER 1061
>UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 966
Score = 35.9 bits (79), Expect = 0.90
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = -1
Query: 466 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 287
Q K AN + RLL S+ + ++P+ ++ KLNP++ N + L LN + L +K++
Sbjct: 330 QHKRANIQV-RLLSSEISKNQSQSPSNNILNQQNKLNPISTNTSQL-LNKQISQLNQKSL 387
Query: 286 LELRRRKNLKALADAEK-SGLKLSKRNPAMKAEKLRERRRKN 164
+ + + ++ A S + S +N ++ R +KN
Sbjct: 388 TQRSQILSKSPISQAANISSMYFSPQNKNSIFQRDRSISQKN 429
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 35.9 bits (79), Expect = 0.90
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = -1
Query: 649 AFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLF 515
A RN PGV+ LAPGG GR +WT A +L LF
Sbjct: 238 AVRNFPGVDVVAVNNLNILVLAPGGVPGRLTLWTAPAVEKLRGLF 282
>UniRef50_Q9C5C0 Cluster: Mitogen-activated protein kinase 18; n=73;
Viridiplantae|Rep: Mitogen-activated protein kinase 18 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 603
Score = 35.1 bits (77), Expect = 1.6
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = -1
Query: 448 TDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYA-AVLKRKAILELRR 272
TDL KS+ I V ++ + RK NP+T ++ K +P A +L+R + +
Sbjct: 232 TDLLGTPKSETISGVRNDKARKYLTEMRKKNPVTFSQKFSKADPLALRLLQRLLAFDPKD 291
Query: 271 RKN-LKALADAEKSGLKLSKRNPA----MKAEKLRERRR 170
R +ALAD GL +R P+ K E ERRR
Sbjct: 292 RPTPAEALADPYFKGLSKIEREPSSQQISKMEFEFERRR 330
>UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 131;
n=26; Amniota|Rep: Coiled-coil domain-containing protein
131 - Homo sapiens (Human)
Length = 1989
Score = 35.1 bits (77), Expect = 1.6
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = -1
Query: 526 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 353
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 762 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 821
Query: 352 LTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRER 176
+T ++ + LK+ IL ++ LK L E + K S RN K KL E+
Sbjct: 822 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 874
>UniRef50_UPI000150A5BE Cluster: hypothetical protein
TTHERM_00069200; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00069200 - Tetrahymena
thermophila SB210
Length = 560
Score = 34.7 bits (76), Expect = 2.1
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = -1
Query: 496 SKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP----NKRVIRATRKLNPLTNNKAML 329
++ KK L + K + + ++I K++ P NK + +N L+ N
Sbjct: 49 TQNKKKIQLMEDKYTEIERENRILLEKITKIMNPPKTTSNKNQYQDQSVMNRLSRNNNYS 108
Query: 328 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGL-KLSKRNPAMKAEKLRERRRKN 164
+ ++ K+K++ +L RRK L ++ + K L ++ R K E +KN
Sbjct: 109 TIQQ-SSYTKKKSLNQLNRRKELLSIMEENKKILERIKSRKSEYDHRKWEEDHKKN 163
>UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 987
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -1
Query: 304 LKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERR 173
+K K+ ++ ++K KALA E+ +KL KAEKL ERR
Sbjct: 410 IKSKSFRKVEKKKKEKALAKREEELMKLDPEFAKHKAEKLEERR 453
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -1
Query: 670 KDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRL 527
++ +AFR++PGV+ LAPGG GR I+T+ A L
Sbjct: 203 RNSSAMKAFRSLPGVDIASPNSLSIRKLAPGGVGGRLTIFTEGAIESL 250
>UniRef50_Q6NE17 Cluster: Putative erythrocyte-binding protein
MAEBL; n=1; Leptospira phage LE1|Rep: Putative
erythrocyte-binding protein MAEBL - Leptospira phage LE1
Length = 859
Score = 34.3 bits (75), Expect = 2.7
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = -1
Query: 487 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 308
KKN +LP+ + +L++++ + + +K I + RK L+ ++ ++ A
Sbjct: 304 KKNSSLPKSQTETKELSKVVNEQDPIETKITQSKNKIDSIRKDKSLSEDEFRTEIEKARA 363
Query: 307 VLKRKAILELRRRKNLKALADAEK 236
L R A+ E + R K+L+D EK
Sbjct: 364 EL-RSAMKEKQARDGFKSLSDLEK 386
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 34.3 bits (75), Expect = 2.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -1
Query: 673 NKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFG 512
++D+G RN PGV+ LAPG H GR ++T A L+ G
Sbjct: 206 DEDEGIKLGARNHPGVDVVEAMHLGVEHLAPGAHPGRLTVFTPGALEVLEERLG 259
>UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr protein;
n=1; Bos taurus|Rep: PREDICTED: similar to Hrnr protein
- Bos taurus
Length = 1606
Score = 33.9 bits (74), Expect = 3.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 558 SSGLSPHSAGLTPYSGHGRHHQNKRRTSTCPNRR 457
SSG H +GL+ S +G+H R++S+C +R
Sbjct: 566 SSGFGQHGSGLSQSSSYGQHGSTSRQSSSCGQQR 599
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 33.9 bits (74), Expect = 3.6
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -1
Query: 652 RAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 524
+A RN+ GV+ LAPG H GR I+T+S+ LD
Sbjct: 216 KAARNLAGVDVVNAKDVSVIHLAPGAHPGRLTIYTESSIKILD 258
>UniRef50_Q4SP98 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 981
Score = 33.5 bits (73), Expect = 4.8
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 577 LPEPASVGSAC*HSG-APHRGCCGRRVSXPDPC 672
LP P G AP RGC G RV PDPC
Sbjct: 687 LPRPQEEAFTLASGGSAPRRGCWGARVCAPDPC 719
>UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1067
Score = 33.1 bits (72), Expect = 6.3
Identities = 22/96 (22%), Positives = 42/96 (43%)
Frame = -1
Query: 547 QSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRAT 368
+S F L + + NLP + + L+ + ++L ++R T
Sbjct: 552 ESQFDNNLSLIDDIENEQSMSNSSNLPLVSNQASAINIKLQEKDFYELLNLESERAAITT 611
Query: 367 RKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 260
+K+N + NNK +LK V + ++ L++ KNL
Sbjct: 612 KKINRIHNNKMVLKSAFEVNVQQSDEVILLKQEKNL 647
>UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas
vaginalis G3|Rep: SNF7 family protein - Trichomonas
vaginalis G3
Length = 199
Score = 33.1 bits (72), Expect = 6.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = -1
Query: 424 SDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALAD 245
SD++ + + +K + RKL+ LT M L+RKA L+RRK L+
Sbjct: 23 SDQLGRKSESIDKEIAEINRKLSELTKQMKMPSNKSRVPTLRRKATELLKRRKMLEGF-Q 81
Query: 244 AEKSGLKLSKRNPAMKAEKLR 182
+ G + + N A + ++++
Sbjct: 82 GKIDGQRFNIDNMAFQQQQMK 102
>UniRef50_Q9PQ05 Cluster: Unique hypothetical membrane lipoprotein;
n=1; Ureaplasma parvum|Rep: Unique hypothetical membrane
lipoprotein - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 705
Score = 32.7 bits (71), Expect = 8.4
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -1
Query: 388 KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRN 209
K+ T + A+L + Y+ VLK KA +L+ NLK + D + + L +++
Sbjct: 47 KKFKTTTNSIELFLEGSAVLASHSYSVVLKEKATGDLKTINNLKLVKDNDLNKLIINELK 106
Query: 208 PAMKAE 191
P M E
Sbjct: 107 PNMGYE 112
>UniRef50_Q1MQI5 Cluster: Outer membrane protein; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: Outer membrane protein -
Lawsonia intracellularis (strain PHE/MN1-00)
Length = 601
Score = 32.7 bits (71), Expect = 8.4
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -1
Query: 361 LNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSG 230
LNP+ KA L + PY K+K IL LR R + D K+G
Sbjct: 419 LNPIQGTKATLNVTPYIGKYKKK-ILTLRSRFDFSFYIDVLKTG 461
>UniRef50_Q23MI1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2209
Score = 32.7 bits (71), Expect = 8.4
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = -1
Query: 493 KQKKNFNLPQPKMANTDLTRLLKSDEIR--KVLRAPNKRVIRATR----KLNPLTNNKAM 332
K K +NLP + L RLLK + ++ K L + R ++ +R +PL +N+
Sbjct: 19 KNDKIWNLPPQIIKKKSLLRLLKKNVMKLFKQLTSSTCRYLKFSRYCIANSSPLYSNQIK 78
Query: 331 LKLNPYAAVLKRKAILELRRRK 266
K + AV+ +K + ELR K
Sbjct: 79 FKFSSTDAVVSQKQLEELRNYK 100
>UniRef50_A3LNR4 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 233
Score = 32.7 bits (71), Expect = 8.4
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = -1
Query: 445 DLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRK 266
D+ RLLK D++ +R N+R ++A + L N + LK A K + ++K
Sbjct: 36 DIERLLKKDKLPADVRTENERAVKALKV--ELQNTQFNLKAKQVAK--KYHMVRFFEKKK 91
Query: 265 NLKALADAEKSGLKLSKRNPAMKAEKLRER 176
++ L A K+ +SK + +K R++
Sbjct: 92 AVRKLKQANKNLEDISKTDVRKDIKKARKQ 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,518,899
Number of Sequences: 1657284
Number of extensions: 10299058
Number of successful extensions: 29943
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 28608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29885
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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