Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F17
         (643 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369...    53   2e-07
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847...    51   7e-07
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86...    50   2e-06
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468...    44   1e-04
03_05_0976 - 29341981-29342229,29342388-29342621,29342771-293430...    29   3.1  
02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571...    27   9.6  

>08_01_0417 -
           3692247-3692329,3692442-3692504,3693233-3693350,
           3694084-3694095
          Length = 91

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 26/55 (47%), Positives = 36/55 (65%)
 Frame = -2

Query: 636 YAHFKQATVGDADPANRPGLXDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 472
           Y  +KQATVGD + A RPG+   + +AK+DAW  + G SKE+A   YI  V+ L+
Sbjct: 30  YGLYKQATVGDVNTA-RPGIFAQRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLL 83


>03_05_0107 -
           20883353-20883627,20883739-20883801,20884608-20884725,
           20885012-20885023
          Length = 155

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 25/54 (46%), Positives = 35/54 (64%)
 Frame = -2

Query: 636 YAHFKQATVGDADPANRPGLXDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 475
           Y  +KQATVGD +  +RPG+   + +AK+DAW  + G SKE+A   YI  V+ L
Sbjct: 30  YGLYKQATVGDVN-TSRPGIFAQRDRAKWDAWKAVEGKSKEEAMSDYITKVKQL 82


>06_01_0108 -
           860080-860162,860276-860338,860857-860974,861481-861492
          Length = 91

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 34/55 (61%)
 Frame = -2

Query: 636 YAHFKQATVGDADPANRPGLXDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 472
           Y  +KQATVG      RPG+ +LK + K+DAW  + G SKE+A   YI  V+ L+
Sbjct: 30  YGLYKQATVGPVT-TGRPGIFNLKDRYKWDAWKAVEGKSKEEAMADYITKVKQLL 83


>04_04_1623 -
           34846056-34846223,34846547-34846644,34846738-34846829,
           34847096-34847202,34847385-34847490,34848108-34848547
          Length = 336

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 22/54 (40%), Positives = 31/54 (57%)
 Frame = -2

Query: 636 YAHFKQATVGDADPANRPGLXDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 475
           Y  +K AT G    A +P    LK +AK++AWHKL     E+A + YI +V+ L
Sbjct: 120 YGLYKIATEGPCT-APQPSALKLKARAKWNAWHKLGAMPTEEAMQKYITVVDEL 172


>03_05_0976 -
           29341981-29342229,29342388-29342621,29342771-29343046,
           29343181-29343457,29343549-29343847,29344021-29344152,
           29344451-29344660,29344812-29344875,29346114-29346260,
           29346477-29346760
          Length = 723

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 180 RKGRKLFHCCSILCFSTLEVPFINV 254
           R GRK   CC IL F+   V F+NV
Sbjct: 418 RSGRKKSACCKILFFTIWNVFFVNV 442


>02_01_0767 -
           5709733-5709789,5709845-5709871,5710374-5710449,
           5710542-5710661,5711321-5711421,5711618-5711743,
           5713504-5713596,5713694-5713816,5713889-5714032,
           5714539-5714672,5714893-5715002,5715315-5715430,
           5716438-5716572,5716650-5716820,5717545-5717709,
           5718165-5718242,5718313-5718445,5718551-5718741,
           5718842-5718914,5719001-5719056,5719142-5719300,
           5719383-5719496,5719562-5719654,5720544-5720726,
           5720801-5720878,5720966-5721052,5721135-5721216,
           5721288-5721400,5721486-5721636,5721759-5721877,
           5721966-5722163,5722377-5722442,5723837-5723957,
           5724224-5724343,5724412-5724542,5725210-5725341,
           5725418-5725519,5726231-5726437,5726510-5726626,
           5727468-5727623,5727721-5727810,5728624-5728848,
           5728969-5729091,5729202-5729284,5729459-5729618,
           5730264-5730374,5730652-5730751,5731375-5731454,
           5731752-5731847,5731961-5732110
          Length = 1991

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 496 VGFLGILLRSAGQFVPSVKFSFTLQVXKTRSIGWIGISNC 615
           V FLG+L   A   V + K    LQ    RS+GW  + +C
Sbjct: 488 VAFLGLLSTLASSEVGAAKVYELLQGKVYRSLGWSTLFDC 527


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,098,616
Number of Sequences: 37544
Number of extensions: 241083
Number of successful extensions: 481
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)