Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F17
         (643 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    73   2e-13
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    59   3e-09
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    49   3e-06
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    48   4e-06
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    35   0.057
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    34   0.075
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    34   0.075

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 34/59 (57%), Positives = 44/59 (74%)
 Frame = -2

Query: 636 YAHFKQATVGDADPANRPGLXDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASIG 460
           YA FKQ TVGD +  ++PG+ DLKGKAK+ AW +  G +K+DAQKAY+ +VE LIA  G
Sbjct: 28  YALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKGLAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 26/56 (46%), Positives = 38/56 (67%)
 Frame = -2

Query: 636 YAHFKQATVGDADPANRPGLXDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIA 469
           Y  FKQAT GD     RPG+ D  G+AK+DAW+ L G ++++A+  Y ++V GLI+
Sbjct: 52  YGLFKQATAGDVQ-GKRPGMMDFVGRAKYDAWNTLKGQTQDEARANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 20/58 (34%), Positives = 39/58 (67%)
 Frame = -2

Query: 636 YAHFKQATVGDADPANRPGLXDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASI 463
           Y+ FKQA++GD +  +RPG+  +  + K+D+W +L G S+++A++ YI+ +  +   I
Sbjct: 34  YSLFKQASIGDVN-TDRPGIFSIIERKKWDSWKELEGVSQDEAKERYIKALNDMFDKI 90


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 26/67 (38%), Positives = 41/67 (61%)
 Frame = -2

Query: 642 NXYAHFKQATVGDADPANRPGLXDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASI 463
           N YA FKQAT G  D   +P   D++G  K++AW+KL   + ++A++AY++ +   I  +
Sbjct: 29  NFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIREV 87

Query: 462 GLKE*KT 442
             KE KT
Sbjct: 88  -QKEYKT 93


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 34.7 bits (76), Expect = 0.057
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = -2

Query: 636 YAHFKQATVGDADPANRPGLXDLKGKAKFDAWHKLAGTSKEDAQKAYIE 490
           Y+ +KQAT G  D   +P    ++ + K++AW++L    + +A+  Y+E
Sbjct: 36  YSLYKQATSGKCDTI-QPYFFQIEQRMKWNAWNQLGNMDEAEAKAQYVE 83


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 34.3 bits (75), Expect = 0.075
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -2

Query: 636 YAHFKQATVGDADPANRPGLXDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIAS 466
           Y  +KQA  G AD    P   +   + KF++W   +  S+  A +AY E++  L  S
Sbjct: 55  YGLYKQAVEGPADSKKGPYWFETVARKKFNSWLANSQMSRSRAMEAYCELMAQLDTS 111


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 34.3 bits (75), Expect = 0.075
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 570 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 475
           + G  K+ AW+K  G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,772,551
Number of Sequences: 27780
Number of extensions: 233447
Number of successful extensions: 496
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)